Pseudomonas sp. UW4: PputUW4_04505
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Entry
PputUW4_04505 CDS
T02357
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00470
D-Amino acid metabolism
ppuu00550
Peptidoglycan biosynthesis
ppuu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PputUW4_04505 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PputUW4_04505 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppuu01011
]
PputUW4_04505 (murD)
Enzymes [BR:
ppuu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PputUW4_04505 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppuu01011
]
Precursor biosynthesis
Amino acid ligase
PputUW4_04505 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AFY21697
LinkDB
All DBs
Position
complement(5172579..5173925)
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AA seq
448 aa
AA seq
DB search
MSLIASDHFRIVVGLGKSGMSLVRFLANRGVAFAVADTRENPPELATLKRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLRDDVELYVMELSSFQLETTDQLNAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQFVVNRQDALSRPLMGEGQPCWTFGLSKPD
FKAFGIREEDGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSSL
RTFAGLEHRCQWVRDLDGVGYYNDSKATNVGAALAAIEGLGADIDGKVVLIAGGDGKGAE
FKDLRDPVAANCRAVVLMGRDSDKIGEAIGDAVPLIRAASLVEAVERCRAAAQPGDVVLL
SPACASFDMFKNYEDRGHQFVQAVEDLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcgtggcgtttgcagtggccgatacgcgggaa
aatccaccggaactggccacgctcaagcgtgactatccgcacgtggaagtgcgttgtggc
gagctggacgtcgaattcctgtgccgcgccgacgagctctacgtgagccccggcctggcg
ctggcgaccccggccctgcaggccgccgccgcccgtggcgtgaaattgtccggcgacatc
gagctgttcgcgcgtaacgcgaaggcgccgatcgtggccatcagcggttccaacgcgaaa
agcaccgtcaccaccctggtcggcgaaatggcagcggcggcgggcaagcgcgttgccgtc
ggtggcaacctcggtacaccggccctggatctgctgcgcgacgacgtcgagctgtacgtg
atggagttgtcgagtttccagctggagaccaccgatcaactcaacgccgaagtggcgacc
gtgctcaatgtcagcgaagaccacatggaccgttacagcggtctgccggcctatcacctg
gccaagcaccggatcttccgtggtgcccggcagttcgtggtcaatcgccaggatgccctg
agccgtccgttgatgggtgagggccaaccgtgctggaccttcggcctgagcaaaccggac
ttcaaagccttcggcatccgtgaagaagacggtgagaagtacctggccttcgaattccag
aacctgatgccggtgcgtgaattgaagattcgcggtgcccacaaccagtccaacgccctg
gcggccctggcccttggccatgctgtcggtctgccgttcgatgccatgctgtcgagcctg
cgcaccttcgccggtctcgagcatcgctgccaatgggtccgcgaccttgatggcgtgggt
tactacaacgactccaaggccaccaacgtcggcgccgcgctggccgccatcgaaggcctg
ggcgcggacatcgacggcaaggtcgtgctgatcgccggcggtgacggcaagggtgccgag
ttcaaggacctgcgcgatccggtggcggccaactgccgcgccgtagtgttgatgggccgc
gactccgacaagatcggcgaagccattggtgacgccgttccgctgatccgcgccgcttcc
ctggtcgaagccgtcgaacgatgccgcgccgccgcccagccgggcgacgtggtgctgctg
tcgccagcctgcgccagcttcgacatgttcaagaactacgaagaccgtggccaccagttc
gtccaagccgtggaggatctggcatga
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