Pseudomonas sp. UW4: PputUW4_04616
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Entry
PputUW4_04616 CDS
T02357
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00550
Peptidoglycan biosynthesis
ppuu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PputUW4_04616 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppuu01003
]
PputUW4_04616 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppuu01011
]
PputUW4_04616 (mrcB)
Enzymes [BR:
ppuu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PputUW4_04616 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PputUW4_04616 (mrcB)
Glycosyltransferases [BR:
ppuu01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PputUW4_04616 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppuu01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PputUW4_04616 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AFY21808
UniProt:
K9NRL4
LinkDB
All DBs
Position
complement(5295691..5298009)
Genome browser
AA seq
772 aa
AA seq
DB search
MTRTRTPRTPKKPPSRGLRPWLGWAIKLSLVGLVVLAGFAVYLDAIVQEKFSGKRWTIPA
KVYARPLELFVGQKLSRDDFLTELDALGYRRESVANGPGAASVNGNTVDLNTRGFQFYEG
MEQAQPVRVRFSGDYVAELAGAKGSKLSVVRLEPLLIGGLYPKNLEDRILIKIDQVPPYL
LETLVAVEDRDFYHHFGVSPKSIARAIWVNGSSGRMRQGGSTLTQQLVKNFYLTNERSLS
RKLTEAMMALLLELHYDKREILEAYLNEVFIGQDGQRAVHGFGLASQFFFSQPLAELKLH
QVALLVGMVKGPSSYNPRRNPERALERRNLVLDVLQEQGVATAEQVEAAKKMPLGVTKRG
SLADSSFPGFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNDTFKRLAGR
KGSDDVEAAMVVTNPETGEVQAMIGSRQASFAGFNRALDAVRPIGSLIKPAVYLTALEKP
SQYTLTSWLSDESFSVKGADGQVWKPQNYDRRSHGTVFLYQGLAHSYNLSTARLGLAVGV
PNVLKTVERLGVSREFPAFPSMLLGAGGMTPIEVATMYQTLANGGFNTPMRGIRSVLTAE
GEPLKRYPFQIQQRFDPASIYLIQSAMQRVMREGTGSSVYNALPRTLTLAGKTGTSNDSR
DSWFAGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMRKADPLPLDMPQPDNIVQA
WVDSRTGQGSDAGCPGAVQMPYIRGSEPPPGAACGGENPAESVMDWVKGWMN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtactcgaactccccgcacccccaaaaaaccaccctccaggggcctgcgcccg
tggctgggctgggccattaaactcagtctggtcggcctggtagtgctggccggattcgcc
gtttaccttgatgcaattgtccaggagaagttctccggcaagcgctggacgattccggcc
aaggtttacgcacgtccgctcgagctgttcgtcggacaaaagctgagcagggatgatttc
ctgaccgagctcgatgctctgggctatcgccgtgaaagcgtggccaacggcccgggcgcg
gcgtcggtcaacggcaataccgttgacctgaacacccgtggcttccagttctatgaaggc
atggagcaagcgcaaccggtgcgggtgcgtttctccggcgattacgtggccgagttggcg
ggggcaaaaggctcgaagctgtcggtggtacgcctggaaccgctgctgatcggtggcctg
tacccgaaaaacctcgaagaccggattctgatcaagatcgatcaggtgccgccgtatctg
ctggaaacgctggtggctgtcgaggaccgcgatttttatcatcactttggtgtttcgccg
aagtcgatcgcccgagcgatctgggtcaacggttcatccggccgcatgcgtcagggtggc
agtaccctgactcagcagttggtcaagaacttctacctgaccaacgagcgcagcctgagc
cgcaagctcaccgaagcgatgatggcgctgctgcttgaactgcattacgacaagcgcgaa
atccttgaggcttacctcaacgaagtgtttatcgggcaggacggtcagcgcgcggtgcac
ggtttcggtctggccagccagttcttcttcagtcagccgctggccgagctcaagctgcat
caagtcgcactgctggtggggatggtcaaagggccgtcttcctacaacccgcgtcgtaat
ccggaacgtgcccttgagcggcgcaacctggttctcgatgtgttgcaggagcagggcgtc
gcgactgccgagcaggttgaggcggcgaagaaaatgccgctgggcgtgaccaagcgcggc
agtctggcggacagctcgttccccgggttcctcgatctggtcaagcgtcagttacgcgaa
gactatcgcgacgaagacttgaccgaggaaggtctgcgcattttcaccagtttcgacccg
atcctgcagatgaaggctgaagcctcggtcaacgacaccttcaagcgcctggccgggcgc
aaggggtctgatgatgttgaagcggcgatggtcgtgaccaacccggagaccggcgaagta
caagccatgatcggcagtcgccaggccagttttgccgggttcaaccgggcgctggatgct
gtgcggccgatcggctcgttgatcaaaccggcggtgtacctgaccgcgctggagaagccg
agccagtacacgttgaccagttggctgtcggacgaatccttctcggtcaagggtgccgac
ggccaggtctggaagccgcagaactatgatcgtcgctctcacggtaccgtcttcctctat
cagggtctggcgcattcctacaacctgtcgaccgcgcgtctcggcttggcggtcggtgtg
ccgaacgtcctgaagacggtggagcgcctgggggtgtctcgtgaattcccggccttcccg
tcgatgttgctcggtgctggcgggatgacgcccatcgaagtggcgaccatgtaccagacc
ctcgccaacggtgggttcaatacgccgatgcgcgggattcgcagtgtgctgactgcagaa
ggcgagccgctcaagcgttatccgttccagattcagcagcgtttcgatccggcctccatt
tacctgatccagagcgccatgcagcgcgtgatgcgagaaggtaccggcagctcggtttat
aacgcgttgccaagaacactgactctcgcgggtaaaaccggtaccagtaacgactcgcga
gacagttggtttgccggtttcagccaggacttgctggcggtggtctggctggggcgcgat
gacaacggcaagacgccattcactggcgccaccggggccttgcaagtctggaccagcttc
atgcgcaaggccgacccgttgccgctggacatgccgcagccggataatatcgtgcaggcc
tgggtggattcgcgaaccgggcaaggttctgatgccggttgcccgggtgccgtgcagatg
ccgtatattcgcggcagcgaaccgcctcccggcgccgcttgcggtggtgaaaaccctgcg
gagtcggtgatggactgggtcaagggctggatgaattaa
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