Pseudomonas sp. UW4: PputUW4_04704
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Entry
PputUW4_04704 CDS
T02357
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuu03400
]
PputUW4_04704 (radA)
DNA repair and recombination proteins [BR:
ppuu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PputUW4_04704 (radA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
AAA_22
DnaB_C
GvpD_P-loop
RecA
AAA
SLFN-g3_helicase
Rad51
AAA_14
nSTAND3
AAA_24
NTPase_1
DUF7125
ABC_tran
MCM
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AFY21894
LinkDB
All DBs
Position
complement(5390061..5391428)
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGSTFPKWAGQCGECGAWNTLTETMVESGGAAAPSGRTGWAGQQAQIK
TLAEVSVEEVPRFSTASSELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLAKSMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIEAIIATARQEKPRVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQVIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggctcaaccttccccaaatgg
gccggccagtgtggtgaatgcggggcctggaacacgctcaccgaaaccatggtggaaagc
ggcggggcagccgcccccagcggtcggaccggctgggccgggcagcaggcgcagatcaag
acgctggccgaagtcagtgtcgaagaagttcctcgcttctccaccgcttccagcgaactc
gaccgggttctgggtggtggcctggtggatggctctgtggtgctgatcggtggcgatccg
ggcatcggcaagtcgaccattctgttgcaaacgttgtgtaacctcgccaagagcatgccg
gcgctgtacgtcaccggtgaagaatcccaacagcaagtggccatgcgtgcgcgacgcctg
ggtttgcctcaggatcaactgcgggtcatgaccgaaacctgcatcgaagccatcattgcc
acggcccgccaggaaaagccccgggtgatggtgatcgactcgatccagacgatctttacc
gagcaactgcaatcggcaccgggtggtgtatcccaggtgcgtgaaagcgcggcgttgctg
gtgcgttatgccaagcagagcggtacggcgattttcctggtgggccacgtcaccaaggaa
ggcgcgctggcgggccctcgggttctggagcacatggtcgacactgtgctgtatttcgaa
ggcgagtccgacgggcgtctgcgtctgctgcgggcggtgaagaaccgtttcggtgcagtc
aatgaactgggcgtgttcggcatgactgacaagggcctgaaagaagtctccaacccttcg
gcgatttttctgacccgtgcccaggaagaagtcccgggcagtgtggtaatggcgacgtgg
gaaggcacgcgaccgatgctggtggaggtgcaggcgctggtggacgatagtcatttggcc
aacccgcggcgggtcacgctggggctggatcaaaaccggttggcgatgttgctggcggtg
ttgcaccgtcatggtggcattccgacccacgaccaggacgtgtttctcaacgtggtcggc
ggggtcaaggtgctcgaaaccgcgtccgatctggcgttgatggcagcggtgatgtccagt
ttgcgtaaccgaccgctgcctcacgatctgctggtgttcggcgaagtggggctttccggt
gaggtgcgaccggtgccaagcggtcaggaacgtttgaaagaggctgccaagcacggcttc
aagcgggccatcgtgcccaagggtaatgcaccgaaggaggcgccaccggggttgcaggtt
attgccgtgactcgcctggaacaggcgctagacgcactgttcgagtga
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