Pseudomonas sp. UW4: PputUW4_04788
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Entry
PputUW4_04788 CDS
T02357
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PputUW4_04788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppuu03400
]
PputUW4_04788
Enzymes [BR:
ppuu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PputUW4_04788
DNA repair and recombination proteins [BR:
ppuu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PputUW4_04788
Prokaryotic type
PputUW4_04788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
DUF6412
PGM_PMM_III
Motif
Other DBs
NCBI-ProteinID:
AFY21978
LinkDB
All DBs
Position
5478547..5479245
Genome browser
AA seq
232 aa
AA seq
DB search
MSNLTARASTVSLPTGLPDAFFDRDAQTLARDLLGKIIRHRVGDLWLSARIIETEAYYCA
EKGSHASLGYTEKRKALFLDGGHIYMYYARGGDSLNFSAQGPGNAVLIKSAYPWVDELSG
PASLAQMLLNNPDAQGHPRPSQKLCAGQTLLCKALGLKVPVWDAKRFDHEVLLVEHVGQT
PSHIIQTTRLGIPHGRDEHLMYRFVDGTYAAYCTRNPLRRGQVEGRDYFVLS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacctgactgctcgagcgtccaccgtgagcctgcccacgggcctcccggacgcg
tttttcgaccgtgacgcgcaaactctggcccgggacttactgggcaaaatcattcgccat
cgagtgggcgacctgtggctcagcgcccggatcatcgagacagaagcctattactgcgcg
gaaaaaggcagccacgcgtccctcggctacacagaaaagcgtaaggctttgtttctggat
ggcggccacatctatatgtattacgcccggggcggcgattcccttaatttcagcgcccag
gggcccggcaacgccgtgctgatcaagtccgcctatccgtgggtcgatgaactgagcggg
ccggccagcctggcacagatgctgctgaacaatcccgacgcccagggtcaccctcgcccg
tcacaaaagctctgcgccgggcaaaccctgctctgcaaggcgctgggtctgaaagtgccg
gtgtgggacgccaaacgcttcgaccatgaagtgctgctggtggagcatgtcggccagacg
ccctcccacatcatccagaccacgcgcctgggcatcccccacggacgcgatgaacacctg
atgtaccgcttcgtcgacggaacctacgcggcttactgcacacggaacccgctgcgtcgg
gggcaagtcgaaggtcgcgattattttgtgctgtcctga
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