Pseudomonas sp. UW4: PputUW4_04817
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Entry
PputUW4_04817 CDS
T02357
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00900
Terpenoid backbone biosynthesis
ppuu01100
Metabolic pathways
ppuu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PputUW4_04817 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ppuu01006
]
PputUW4_04817 (ispA)
Enzymes [BR:
ppuu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PputUW4_04817 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PputUW4_04817 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
PputUW4_04817 (ispA)
Prenyltransferases [BR:
ppuu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PputUW4_04817 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AFY22007
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All DBs
Position
5512185..5513072
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AA seq
295 aa
AA seq
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MIAAYSATSQARVNAALETLFTAPGPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGG
KAEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKKFDEACAILAGDGLQSLA
FSALLDPRLSTSDAEIRLQMVSALALAAGPAGMVGGQAIDLGSVGLKLDQKALEYMHRHK
TGALIEASVKLGALASGRAEKDELKSLQTYAQAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALLGLDAAKAYALELRDQALHALRPFDAAAEPLRDLARYIVDRRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagcgtactcggccaccagccaggcccgcgtcaatgcggctctggaaaccctg
ttcacggcaccaggccccgagttggcgcggctgtacgaagccatgcgctacagcgtgatg
aatggcggcaaacgcgtgcgtccactgttggcctacgccgcgtgcgaagcgttgggcggc
aaggccgagcaagccaacggcgcggcctgtgccgtggagctgatccacgcctattcactg
gtgcatgacgatttgccggcgatggacgatgacgacctgcgtcgcggccagcccaccacc
cacaagaaattcgatgaagcctgtgcgatcctcgccggcgacggcttgcagagcctggcc
ttcagcgccctgctagacccgcgtctgagcacgtcggatgccgaaatccgcctgcaaatg
gtcagcgccctggcactggcggcgggcccggcaggcatggtcggcggtcaggccatcgac
ctcggttcggtcggcctgaagcttgaccagaaagccctggaatacatgcaccggcacaag
accggtgcgctgatcgaagccagcgtcaaactcggcgccctggccagcggtcgtgccgag
aaagacgaactcaagtccctgcagacttatgcacaggccatcggcctggcattccaggtc
caggacgacattctcgacgtcgaaagcgataccgccaccctcggcaaacgccagggcgcg
gacattgcccgggacaagccgacctacccggccctgctcggcctcgacgccgccaaggcc
tatgccctggagttgcgcgaccaggccctgcacgccctgcgaccgtttgacgcggcggcc
gagccgttgcgggatctggcccggtatatcgtcgatcgccgcagttga
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