Pseudomonas sp. UW4: PputUW4_04844
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Entry
PputUW4_04844 CDS
T02357
Symbol
mscS4
Name
(GenBank) MscS mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuu02000
]
PputUW4_04844 (mscS4)
Transporters [BR:
ppuu02000
]
Other transporters
Pores ion channels [TC:
1
]
PputUW4_04844 (mscS4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AFY22034
LinkDB
All DBs
Position
complement(5539511..5541634)
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AA seq
707 aa
AA seq
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MIRLKTAILLGALLFVGSEQLEAAAIPGLPATATAATPPAHPEPLVQGGLLGAISSSIDE
VQTRLDLNQNLLDAWRLRADRAADEVDHLVNQPSARSPLSVVVDFLILTCVWAAVFACLW
LLGRLLAKRLCAHRLLLSRERGQALLGYVLPYTFAAVISLPLTIYASQFLPVSAGRALAL
CLAYATSAGIFAASLVMSLMVVFSAGHKRRAVQIIREKSPRPLFVIGFLVALSDALTSQQ
ISHLLGSNLTSSIAVFTGMAASLSFGLLVIRMRRPVAHVIRILPLAQRQSQPALRETLRI
FSGLWYWPILLMVLVSIINLIGVGADNQMVLRSALFTTVLLIATVFLSTTLHHLFKARSE
ADLRRSSAYKERFLNLSHALLRIGMAIVFIDILGRIWGVSLFEFAVSNAVGRAISDSLSH
IGLILLVTWMVWVVLDTAIQEALKPPTNKRSARQPSTRVKTILPLLRNAIKIILVVICAI
TTMANLGINVAPFLAGAGVIGLAIGFGSQQLVQDVITGLFIIIEDTLSIGDWVVLDSGHA
GTVEGLTIRTLRLRDGKGFVHSVPFGQIKAVTNQSRQFAYAFFSVQFTYDTDVDKAIELI
REAGHSISNDPFLRYNLQGPLDVFGVDRMDLNGVVLTAQFRTVSGGQYAVSRAFNQRLKK
LVDNCPWVNFAQTYPQQALVPRHPVEPTPEAEPEHAAVLMPDRPRSQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaggctcaagaccgcgatactgctgggggcgttgctgtttgtgggcagcgagcaa
ctggaggccgccgcgataccggggctgccggccaccgcgaccgctgcgacgccgccggcc
caccccgaaccgctggtgcaaggcggattactgggggccatcagttcaagcatcgacgag
gtccagaccaggcttgatctcaatcaaaacctgctcgacgcctggcgcctgcgtgccgac
cgcgcggccgatgaagtggatcatttggtcaatcagccttcggcccgctcgcccttgagc
gtcgttgtcgatttcctgatactgacctgcgtgtgggccgccgtgtttgcctgtctttgg
ctacttgggcgattgttggccaaacgcctgtgcgcgcatcgcctgctgctcagtcgtgaa
cggggccaggcgttgctcggttacgtgctgccctacacctttgcggcggtgatcagcctg
ccgctgacgatatatgccagccagttcttgccggtttcggcgggccgggcgctggcgctg
tgcctggcttatgccaccagcgcggggatctttgccgcgtcattggtgatgtcgctgatg
gtggtgttcagtgccggccacaagcgccgggcggtgcagatcatccgcgagaagagcccc
aggccgttattcgttatcggctttctggtggccttgagcgatgccctgaccagccagcag
atctctcatctattgggtagcaatctcaccagcagcattgcggtgttcaccgggatggcg
gcctcgctttcctttggcttgctggtgatccgcatgcgtcgcccggtcgctcacgtgatc
cgcatccttccgctggcccagcgccaaagtcagccggcattgcgtgagactctgcggatt
ttttccgggctctggtattggccgatcctgttgatggtgctggtctcgatcatcaacctg
atcggcgttggcgcggacaaccagatggtactgcgtagcgccttgttcaccacggtattg
ctgattgccacggtgtttctcagcaccacgctgcaccatctgttcaaggcgcgcagcgaa
gcggacctgcgccgcagcagcgcctacaaggagcgttttctcaacttgtcccacgctttg
ctgcgcatcggcatggccattgtgttcatcgatatcctcgggcggatctggggcgtgtcg
ctgttcgaattcgcggtgagcaatgccgtgggccgggcgatcagtgattccctgagccac
atcggtttgatcctcctggtgacctggatggtctgggtggtgctcgacacggcgattcag
gaggccctgaaaccgccgaccaacaagcgttcggcacgccagccgagtacgcgggtgaaa
accatcctgccgctgctgcgcaatgcgatcaaaatcatcctggtggtgatctgcgcgatc
accaccatggccaacctgggcatcaacgtcgcgccattcctggccggtgccggggtcatc
ggcctggcaatcggtttcggttcccagcaactggtgcaggatgtgatcaccgggctgttc
atcatcatcgaggacaccctgtccatcggtgattgggtggtgcttgattccgggcatgcc
ggcacggtcgaaggcctgaccatccgcaccttgcgcctgcgcgacggcaagggcttcgtg
cactcggtaccgttcgggcagatcaaggccgtgaccaaccagtcgcggcaattcgcctat
gcgtttttctcggtgcaattcacctacgacaccgacgtcgacaaggccattgaactgatc
cgcgaggccgggcattccatcagcaacgacccgttcctgcgctacaacctgcaagggccg
ctggatgtgtttggcgtcgacaggatggacctcaatggtgtggtgctgaccgcgcaattt
cgtacggtgtccggtggccaatatgcggtgagccgggcctttaaccagcgattgaaaaag
cttgtggataactgcccgtgggtgaacttcgcgcaaacttatccacagcaggcactggtg
cctcggcatccggttgagccaacacccgaggctgagccggagcatgcggcggtgttgatg
ccggatcggccgcggtctcaatag
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