Pseudomonas sp. UW4: PputUW4_04928
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Entry
PputUW4_04928 CDS
T02357
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PputUW4_04928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppuu02000
]
PputUW4_04928
Transporters [BR:
ppuu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PputUW4_04928
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
SMC_N
nSTAND_NTPase5
AAA_25
AAA_22
nSTAND3
FeoB_N
AAA_28
AAA_29
Rad17
Motif
Other DBs
NCBI-ProteinID:
AFY22118
LinkDB
All DBs
Position
complement(5623227..5624351)
Genome browser
AA seq
374 aa
AA seq
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MSQVDSSAGANDVLVSFRGVQKSYDGENLIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMM
LAGFETPTAGEILLAGRAINNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLTVRGMNKS
DVSARVKRVLSMVQLDSFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQL
REHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRTLYEEPKNT
FVANFIGENNRLNGRLHSQTGDRCIVELGRGEKVEALAVNVGQTGEPVTLSIRPERVSLN
GSSDQCVNRFSGRVEEFIYLGDHVRVRMEVCGKTDFFVKQPIAELDPALAVGDVVPLGWQ
VEHVRALDPLLEAN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggtcgattcaagcgcaggggccaatgatgttctggtcagctttcgtggagtg
cagaagagctacgacggcgagaacctgatcgtcaaagacctcaacctggacattcgcaaa
ggcgaattcctcacgttgctcgggccgtccggctccggcaagaccaccagcctgatgatg
ctcgccggcttcgaaacgccgaccgcaggcgaaatcctgttggccgggcgcgccatcaac
aacgtgccaccgcacaaacgcgacatcggcatggtgtttcagaactacgccttgttcccg
cacatgacggtggccgagaacctggcgttcccgctgaccgtgcgcggcatgaacaagagc
gacgtcagtgcccgggtcaagcgcgtactgagcatggtccagctcgacagcttcgcccag
cgttacccggcgcagctctccggtggtcagcaacagcgtgtggcattggcccgtgcgctg
gtgttcgagccgcaactggtgctgatggacgaacccctcggcgcactcgacaaacaactg
cgtgaacacatgcagatggaaatcaagcacctgcaccagcgcctgggcgtcaccgtggtc
tacgtgacccacgatcagggcgaagccctgaccatgtccgaccgtgtggcggtgttccat
cagggcgaaatccagcagatcgcgccgccgcgcaccctctacgaagagccgaaaaacacc
ttcgtcgccaacttcatcggcgagaacaaccgtctcaatggccgcctgcacagtcaaacc
ggcgaccgttgcattgtggaactcggacgcggtgagaaggtggaagccctggcggtcaac
gttggccagaccggcgagccggtgaccctgtccattcgtccggaacgagtgagcctcaac
ggttccagcgatcaatgcgtcaaccgcttctccgggcgggtcgaggaattcatctatctg
ggcgaccacgtccgggtgcgcatggaagtctgcggcaagaccgacttcttcgtgaaacag
ccgattgccgagcttgatcctgcgctcgccgtcggcgacgtggtaccgcttggctggcag
gtcgagcacgtgcgcgcgcttgatcctcttttagaggcgaactga
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