KEGG   Pseudomonas sp. UW4: PputUW4_04994
Entry
PputUW4_04994     CDS       T02357                                 
Symbol
fecI5
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppuu  Pseudomonas sp. UW4
Pathway
ppuu02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ppuu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PputUW4_04994 (fecI5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppuu03021]
    PputUW4_04994 (fecI5)
Transcription machinery [BR:ppuu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PputUW4_04994 (fecI5)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH Sigma70_ECF HTH_24 Sigma70_r3 HTH_17 MerR HTH_29 HTH_31 FaeA Peripla_BP_3
Other DBs
NCBI-ProteinID: AFY22184
LinkDB
Position
5703245..5703763
AA seq 172 aa
MSSVPSPQSELVGALYRDHRGWLLAWLRRNVACPQRAEDLSQDTFVRLLGREELKEPREP
RAFLVAIAKGLLFDYFRRAALEQAYLTELMLIPEAEQPSAQEQQMILEDLKNIDRLLGKL
STKARAAFLYNRLDGLGHAEIAERLGVSVPRVRQYLAQGIRQCYIALYGEPT
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtcgtcagtcccaagccctcaaagtgaactcgtcggtgcgttgtatcgcgaccatcgc
ggttggctattggcctggcttcgacgcaatgtcgcctgcccacagcgggccgaagacctg
agccaggacacgttcgtgcgtttgctgggccgcgaggaactgaaggaaccacgcgaaccc
cgggcattcctggtggccatcgccaagggcctgctgttcgattatttccgtcgcgccgcg
ctggagcaggcttacctcaccgaactgatgctgattcccgaagccgaacaaccgtcggcg
caagagcagcagatgatcctcgaagacctgaaaaacatcgaccgtttgctcggcaagctt
tccaccaaggcccgggctgcgttcctctacaaccgtctcgacggtcttggccacgcagaa
atcgccgagcgcctgggggtatcggtgccgcgggtacgccagtacctggcccagggcatt
cgccagtgctatatcgcgctatatggtgagccgacatga

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