Pseudomonas sp. UW4: PputUW4_05012
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Entry
PputUW4_05012 CDS
T02357
Symbol
glyA3
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00260
Glycine, serine and threonine metabolism
ppuu00460
Cyanoamino acid metabolism
ppuu00630
Glyoxylate and dicarboxylate metabolism
ppuu00670
One carbon pool by folate
ppuu00680
Methane metabolism
ppuu01100
Metabolic pathways
ppuu01110
Biosynthesis of secondary metabolites
ppuu01120
Microbial metabolism in diverse environments
ppuu01200
Carbon metabolism
ppuu01230
Biosynthesis of amino acids
ppuu01240
Biosynthesis of cofactors
Module
ppuu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PputUW4_05012 (glyA3)
09102 Energy metabolism
00680 Methane metabolism
PputUW4_05012 (glyA3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PputUW4_05012 (glyA3)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PputUW4_05012 (glyA3)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PputUW4_05012 (glyA3)
Enzymes [BR:
ppuu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PputUW4_05012 (glyA3)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AFY22202
UniProt:
K9NRH9
LinkDB
All DBs
Position
complement(5723504..5724757)
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVECKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCVTLAGWICDILDNLGDADVEANVAEQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgtcaggaagatcacatcgagctgatcgcgtcggagaactacaccagc
aagcgcgtgatgcaggcccagggcagcggcctgaccaacaagtacgccgaaggttacccg
ggcaagcgctactacggtggctgcgagcacgtagacaaggtcgaggccctggccatcgag
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccgcactccggttcctcg
gccaacagcgccgtgtacctggcgctgctgcaagccggcgacaccatcctcggcatgagc
ctggcccacggcggtcacctgacccacggcgccaaagtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacaccaagaccggtctgatcgactacgacgaagtcgag
cgcctggccgtcgagtgcaagccgaagatgatcgttgccggtttctcggcctactccaag
accctcgacttcccgcgcttccgccagatcgctgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgttgccggtctggttgctgccggtctgtacccgaatccgctgccttat
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaagtccaacgaagaaatcgagaagaagctcaacgcggcagttttcccgggtgcc
cagggcggcccgctgatgcacgtgatcgccggtaaggcggtttgcttcaaggaagcgctg
gaacctggcttcaaggcttaccagcaacaagtgatcgacaacgcccaggccatggccggc
gtgtttatcaaacgcggctacgatgtagtgtccggcggtaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctgaccggcaaggacgcggatgccgccctcggtcgcgcc
catatcactgtgaacaagaatgctgtgccgaacgatccacagtcgccgttcgtgacctcc
ggcctgcgtatcggcaccccggcggtgaccacgcgcggcttcaaggtggcccagtgcgtc
acgctggccggctggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaagcc
aatgtcgccgagcaagtggcagccttgtgcgcggacttcccggtttatcgctga
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