Pseudomonas sp. UW4: PputUW4_05132
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Entry
PputUW4_05132 CDS
T02357
Symbol
rpoH
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppuu
Pseudomonas sp. UW4
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppuu03021
]
PputUW4_05132 (rpoH)
Transcription machinery [BR:
ppuu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PputUW4_05132 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AFY22322
LinkDB
All DBs
Position
complement(5851758..5852612)
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AA seq
284 aa
AA seq
DB search
MTNSLQPAYALVPGANLEAYVHTVNSIPLLSPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNHNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctttgcaacctgcatatgctctggtcccgggtgcgaacctggaggcctat
gtgcacaccgttaacagcattccattgctgtcgccggagcaggagcgtgaactggccgag
agtctctattatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacatatcgcccgtagctattccggctacggcctggcccaggctgacctgatc
caggaaggcaacgtcggcctgatgaaggccgtgaagcgcttcaacccggaaatgggcgtg
cgcctggtgtcctttgcggtgcactggatcaaggcggaaatccacgagttcatcctgcgc
aactggcgcatcgtgaaagtcgcgaccaccaaggcccagcgcaagctgttcttcaacctg
cgcagccagaaaaaacgcctggcctggttgaacaacgaggaagttcatcgcgtcgctgaa
agcctgggtgtagagcctcgggaagtgcgtgagatggaaagccgcctgaccggccatgac
atggccttcgacccggctgccgaagcggacgacgacagtgctttccagtcgccggccaac
tatctggaagaccaccggtacgacccggcgcgtcaactggaagacgccgactggagtgac
aactccaaccacaacctgcacgaagcgctggaagtgctggacgaccgtagccgtgacatt
ctctaccagcgctggctggcggaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtgtcggccgagcgtattcgccagctcgagaagagcgcgatgaacaagctcaagttg
tcgatcgctgcgtaa
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