Pseudomonas sp. UW4: PputUW4_05228
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Entry
PputUW4_05228 CDS
T02357
Symbol
gcvP2
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00260
Glycine, serine and threonine metabolism
ppuu00630
Glyoxylate and dicarboxylate metabolism
ppuu00670
One carbon pool by folate
ppuu00785
Lipoic acid metabolism
ppuu01100
Metabolic pathways
ppuu01110
Biosynthesis of secondary metabolites
ppuu01200
Carbon metabolism
Module
ppuu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PputUW4_05228 (gcvP2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PputUW4_05228 (gcvP2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PputUW4_05228 (gcvP2)
00670 One carbon pool by folate
PputUW4_05228 (gcvP2)
Enzymes [BR:
ppuu01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PputUW4_05228 (gcvP2)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AFY22417
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Position
complement(5954748..5957621)
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AA seq
957 aa
AA seq
DB search
MSQLPSLSQLHDPNAFLRRHLGPDAAEQQAMLDSLGLGSRVELIEQTVPPGIRLNRALDL
PPALDEEAALAKLRGYAEQNQIWTSLIGMGYHGTLTPAVILRNVLENPGWYTAYTPYQPE
IAQGRLEALLNFQQMTIDLTGLELANASLLDEATAAAEAMALAKRVAKSKSNLFFVDENC
HPQTISVVQTRAEGFGFELIVDAVDNLKQHQVFGALLQYPDTHGEIHDLRPLIDHLHAQQ
ALACVATDLLSLLLLTPPGELGADVVFGSSQRFGVPMGYGGPHAAFFASRDEYKRAIPGR
IIGVSKDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIASFYAVYHGPEGLKRI
AQRVHRLTCILAAGLERKGITRVNRHFFDTLTLEVGGTQTAIIESARAAQINLRILGRGE
LGLSLDETCDETTVAKLFDVFLGADHGLSIEDLDAEVLPGGIPQGLVRTSPYLRHPVFSA
HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPQFANLHPFVPKEQ
AAGYGLMIEELERWLCAITGFDAICMQPNSGAQGEYAGLLAIRKYHESRQQGGRDICLIP
SSAHGTNPASAQMAGMRVVIVECDEAGNVDLDDLKEKAAQAADKLACLMATYPSTHGVYE
EGISEICEVIHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGM
GPIGVRAHLAPFVANHPVVPIDGPQPQNGAVSAAPWGSASILPISWMYIAMMGPQLADAS
EVAILAANYLARHLSGAFPVLYTGRNERVAHECILDLRPLKALTGITEEDVAKRLMDYGF
HAPTMSFPVPGTLMVEPTESESKAELDRFIGAMLSIRAEINEVQNGNWPAEENPLKGAPH
TLADITGVWERPYSIEQAVTPDAHTKAHKYWPVVNRVDNVYGDRNLFCACVPVDDYR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttgccgtccctgagccagttacacgaccccaatgcctttctgcgccgccac
ctaggacccgatgccgccgagcaacaggcgatgctcgacagccttggcctgggcagccgg
gtcgaattgatcgagcaaaccgtgccgccaggcatccgcctcaaccgggcgctggacctg
cccccggcgctcgatgaagaggccgccctggccaagctgcgtggttatgccgagcagaac
cagatatggaccagcctgatcggcatgggctaccacggtaccctcacaccggcggtcatt
ctgcgtaacgtactggaaaatcccggctggtacaccgcgtacacaccctatcaaccggag
atcgcccaagggcggctcgaagcgctgctgaacttccagcaaatgaccatcgatctgacc
ggtctggaactggccaacgcctcgctgctcgatgaggccaccgccgcggcggaagccatg
gccctggccaagcgggtcgccaagtccaaaagcaatctgttctttgtcgacgaaaactgc
cacccgcaaaccatttccgtggtgcagacccgcgccgaaggtttcggcttcgagctgatc
gtcgacgctgtggataacttgaagcagcaccaggtgttcggcgcgctgctgcaataccct
gacacccacggcgagatccacgacctgcggccgctgatcgatcacctgcacgcgcaacag
gccctggcctgtgtcgccacggatttgctgagcctgttgctgctgaccccgccgggtgaa
ctgggcgccgatgtggtgttcggctcgtcccagcgatttggcgtgcccatgggctacggc
gggccacatgcggcattttttgccagtcgcgatgagtacaaacgggcgattcccgggcgc
atcatcggtgtttcgaaagatgcgcgaggcaacaccgccctgcgcatggccctgcaaacc
cgcgagcagcacattcgccgggagaaggccaactccaacatctgcacggcccaggtgctg
ctggccaatatcgccagtttctatgcggtctaccacggcccggaagggctcaagcggatc
gcccagcgggttcaccggctgacctgcatcctggccgccgggcttgagcgcaagggtatc
acccgggtcaatcggcacttcttcgacaccctgacgctggaagtcggcggaacccagacc
gcgatcatcgaaagtgcccgggccgcgcagatcaacctgcgcattctcgggcgcggcgaa
ctgggcttgagtctcgacgagacctgcgacgaaaccaccgtggcgaagctgttcgacgtg
tttctgggggccgatcacgggctcagtatcgaggacctggatgccgaagtcctgcctggc
ggaattccccaagggttggtgcgaacttcgccttatctgcgccatccggtattcagcgcc
catcacagcgaaaccgagatgctgcgctacctcaagcaactggaaaacaaggacctggcg
ctcaatcaatcgatgatcccgctgggctcctgcaccatgaagctcaacgccaccagcgag
atgatcccgatcacctggccgcagtttgccaacctgcacccgttcgtgccgaaagagcag
gccgccggatacgggctgatgatcgaggagctggagcgctggttgtgcgcgatcaccggt
ttcgatgcaatctgcatgcagcccaactccggtgcccaaggcgaatacgccggcctgctg
gcgattcgcaaataccatgagagccggcaacagggcggccgcgatatctgcctgattcct
tcgtcggcgcacggcaccaatcccgcgtcggcgcaaatggccgggatgcgcgtggtgatc
gtcgagtgtgacgaggcgggcaacgtcgacctggatgacctcaaggaaaaagccgcgcag
gccgccgacaaactcgcctgcctgatggcgacctatccttcgacccatggcgtgtatgag
gaaggcatcagcgaaatctgtgaagtgatccaccagcatggcggtcaggtgtacatggat
ggcgccaacctcaacgcccaggtcgggctggcgcggccggcggatattggcgccgatgtc
tcgcacatgaacctgcacaagaccttctgcattccccatggtggcggcggtccgggcatg
gggccgatcggagtacgggcgcatctggcgccgttcgtggccaaccatccggtggtgccg
atcgacgggccgcagccgcagaatggcgccgtcagtgcggcgccctggggcagtgcaagc
attctgccgatcagctggatgtacatcgccatgatggggccgcaactggcggacgccagc
gaagtggcgatccttgctgcgaattacctggcgcggcatttgtccggtgcctttccggtg
ctctacaccgggcgtaatgaacgggtagcccacgaatgcatcctcgacctgcgaccgctc
aaggcgttgaccggcatcaccgaagaggacgtcgccaagcgcctgatggactacggcttc
cacgccccgaccatgtcgttcccggtgccggggacgctgatggtcgaaccgaccgaaagt
gaatcgaaggcggagctggacaggtttatcggggcgatgctgagcatccgcgcggaaatc
aacgaggtgcagaacggtaactggccggcagaagaaaacccgttgaaaggtgcgccgcat
acgctggccgatatcaccggcgtgtgggagcggccgtacagcatcgagcaagccgtcacg
ccggacgcgcataccaaggctcacaaatactggccggtggtgaaccgggtggacaatgtg
tatggagatcggaacctgttttgtgcgtgtgtgccggttgacgactaccgctga
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