Pseudomonas sp. UW4: PputUW4_05274
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Entry
PputUW4_05274 CDS
T02357
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
ppuu
Pseudomonas sp. UW4
Pathway
ppuu00860
Porphyrin metabolism
ppuu01100
Metabolic pathways
ppuu01110
Biosynthesis of secondary metabolites
ppuu01120
Microbial metabolism in diverse environments
ppuu01240
Biosynthesis of cofactors
Module
ppuu_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
ppuu_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
ppuu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PputUW4_05274 (hemD)
Enzymes [BR:
ppuu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
PputUW4_05274 (hemD)
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Gene cluster
GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
AFY22463
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All DBs
Position
complement(6003514..6004281)
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AA seq
255 aa
AA seq
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MIGWRLLLTRPADEAAALGSFLAGQGIFSSSLPLLDIVPIAATDTMRQVIQTLEKFCAII
VVSKPAARIGVELLERFRPAPPAVKWFSVGAATAQILQSHGLDVSFPAEGDDSEALLELS
RLREAIAQPDGRVLILRGEGGRELLAERLRELGASVEYLELYRRAMPIYPPQVLPQRIRA
ERLNGLVVSSGQGFEHLHQLAGDAWPQLARLPLFVPSPRVAELARVAGAKTVVDCRGASA
AALLTALREQPVPVF
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggctggcgcttgctgctgacgcgtcccgccgatgaggcggcggcgctgggcagc
tttttggccggacaggggattttcagcagcagtctgccgcttttggacatcgtgccgatt
gcggcgactgacacaatgcgccaggtgattcagacgctggaaaagttctgcgcaatcatc
gtggtcagcaagccggccgcccggatcggcgtcgaactgctcgagcggtttcggcccgcg
ccgcccgctgtgaagtggttcagcgtcggcgcggcgacagcgcagatcctccagtctcac
ggattggatgtgagcttcccggcagaaggcgatgacagtgaggccttgctcgaactttcc
cgcctgcgcgaggctatcgcacaacccgatgggcgagtactgatcctgcgcggggagggt
gggcgcgaattgctggctgagcgtttgcgtgagcttggtgctagtgtcgagtatctggag
ctgtaccgccgggcaatgccgatttacccgccgcaagtgctaccgcaacggatccgggcg
gaacgcctgaacgggctggtggtcagcagtggacaaggttttgagcacctgcatcaattg
gccggcgatgcctggccgcaattggcgcggttgccgttgtttgtaccaagccccagggtt
gccgagctggcgcgtgtcgccggggccaaaacagttgtggattgtcgcggcgcgagtgcc
gcggccttgctgacggcgttacgggagcaacccgtacccgttttctga
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