Pseudomonas parafulva: NJ69_00330
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Entry
NJ69_00330 CDS
T03520
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppv
Pseudomonas parafulva
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppv03016
]
NJ69_00330
Enzymes [BR:
ppv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NJ69_00330
Transfer RNA biogenesis [BR:
ppv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NJ69_00330
Prokaryotic type
NJ69_00330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AIZ31562
LinkDB
All DBs
Position
74532..75449
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETVMQMGQTTSTGDAEGEVLQTREVTVGRTDIEAVIPRFRGEIR
QIPPMYSALKRDGQPLYKLARAGEVVEREARSVTIGRLELLECEGTRARLSVGCSKGTYI
RTLVEDMGEVLGCGAYVAELRRTQAGPFLLAQTVTLEELEQAHAEGGNEALDRFLLPSDS
GLQDWPLVLLSEHSAFYWLHGQAVRAPDAPQFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtcaaacgcatccgccgcaacgtcagcggcatcatcctgctcgacaagcca
cttggctttacctccaatgcggccctgcagaaagtgcgctggttgctcaacgcagaaaag
gccggccataccggtagcctcgatccgctggccaccggcgtgctgccgctgtgcttcggc
gaggcaacgaagttttcccagtacctgctcgactccgacaagggttacgagacggtcatg
cagatggggcagactaccagcaccggcgacgctgagggcgaggtcctgcagacacgcgag
gtgaccgttggtcgcacggacatcgaggctgtgataccgcgatttcgcggcgagatccgc
cagattccgccgatgtattcggcgctcaagcgtgacggtcagccgttgtacaagcttgcc
cgcgccggagaggtagtggagcgcgaggcgcgttctgttactattggccgcttggaactg
ctcgagtgtgaaggcacgcgggcgcgcttgtcggtcggttgcagcaaaggcacttatatc
cgcacgctggtggaggatatgggtgaggtgttgggctgtggggcgtatgtcgcagaactg
cggcgaacccaagccgggccgttcctgctggcacagaccgtgacgctcgaagaactcgag
caggcccatgccgagggtggcaacgaagcgctcgatcgcttccttctgccctcggacagc
gggttgcaggactggccgctggtgctgttgtccgagcacagcgcgttctattggctgcac
ggccaggcagtacgtgcaccggatgcgccgcagttcggcatggtgcgcgtacaagatcac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgtattgcgccgcgtcga
ctgattcggtcggaatga
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