Pseudomonas parafulva: NJ69_01700
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Entry
NJ69_01700 CDS
T03520
Name
(GenBank) exodeoxyribonuclease
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NJ69_01700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_01700
Enzymes [BR:
ppv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NJ69_01700
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NJ69_01700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIZ35521
UniProt:
A0AAI8KDA2
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All DBs
Position
complement(389524..390903)
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AA seq
459 aa
AA seq
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MIRDPFERLGLDREVLTVTQLNGRARVLLEDVFRSVWVEGEISNLARPASGHLYFTLKDS
GAQVRCALFRQNAARVRQALRDGLAVKVRGKVSLFEGRGDYQLIVDSVEPAGDGALRLAF
EALKEKLGEQGLFAAERKQPLPAHPRRIGIVTSPTGAVIRDIISVFARRAPQVELNLIPT
AVQGREAVGQIVRALQRADSLGFDALILARGGGSLEDLWCFNEEPVARAIAACVTPIVSA
VGHETDVSISDFVADVRAPTPSAAAELLAPDSSGLLQRLDSLQRRLLLRMNARLSHDRLR
LDGLARRLRHPRERLRQQAQRLDDLDMRLRRAFMLDLNQRQQRLGRLDTRLAAQHPGRTL
ALLGQRLDSLGERLPRAMQAVLRDRRQRFQAQLQTLQIVSPLATLARGYSILLDDRGQAI
RSAAQTHNGQRLTARLDQGELQVRVEDNHQTPVTLSLLD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatcagagaccctttcgaacgactcggcctggaccgcgaggtcctcaccgtcacccag
ctcaacggccgcgcccgcgtgctgctcgaggacgtgttccgcagtgtctgggtggaaggc
gagatatccaacctcgcccgcccagcctccggccacctctacttcaccctgaaagacagt
ggtgcccaggtgcgctgcgcgctgttccggcagaacgctgcgcgggttcgccaggccctg
cgtgacggtctggcggtgaaggtacgcggcaaggtgtcgctgttcgagggccgtggcgac
taccagttgatcgtcgacagcgtcgagccggcgggcgatggcgccctgcgcctggccttc
gaagccctgaaggaaaaactgggcgaacagggcctgttcgccgccgagcgcaaacagccg
ctgccggcgcatccgcggcgcatcggcatcgtcacctcccccaccggcgcggtgatccgc
gacatcatcagcgtcttcgctcgccgcgcaccgcaggtggaactcaacctgatccccacg
gcggtgcaggggcgcgaagccgtcgggcagatcgtgcgcgcgctgcagcgggccgacagc
cttggcttcgacgcgctgattctggcccgtggcggtggctcgctggaagacttgtggtgc
ttcaacgaagaaccggtggcgcgcgccatcgcggcctgcgtcacgccgatcgtcagcgcg
gtggggcatgagaccgatgtgtcgatcagcgacttcgtcgccgatgtgcgggcccccacg
ccctcggcggccgccgaattgctggcgcccgacagcagcggtctgctgcaacgcctggac
agcctgcaacgccgtctgctgttgcgcatgaatgcccgcttgagccacgaccgtctgcgc
ctcgacggcctggcccgacgcctgcgccatccacgcgagcgactgcgccagcaggcccag
cgcctggacgacctggacatgcgcctgcgccgcgccttcatgctcgacctgaaccagcgc
cagcagcgcctgggccgtctcgacacgcgcctggccgcgcagcatcccgggcgcaccctg
gccctgctgggacagcgcctggacagcctgggcgaacgtttgcccagggccatgcaggca
gtgcttcgtgaccgtcgccagcgcttccaggcgcaattgcaaacgttgcagatcgtcagc
cccctggccaccctggcgcgcggctacagcatcctgctcgacgaccgtggccaagcgatc
cgcagcgccgcccagactcacaacggccaacgcctgaccgcacgcctggatcagggcgag
ttgcaggtgcgggtcgaagacaaccatcagaccccggtcaccctctcgcttctggactga
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