KEGG   Pseudomonas parafulva: NJ69_01805
Entry
NJ69_01805        CDS       T03520                                 
Name
(GenBank) RNA-binding protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ppv  Pseudomonas parafulva
Pathway
ppv02024  Quorum sensing
ppv03060  Protein export
ppv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    NJ69_01805
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NJ69_01805
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NJ69_01805
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppv02044]
    NJ69_01805
Enzymes [BR:ppv01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     NJ69_01805
Secretion system [BR:ppv02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   NJ69_01805
  Eukaryotic Sec-SRP protein
   NJ69_01805
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase AAA_33 YqeC KTI12 AAA_16 AAA_31 ParA nSTAND3 AAA_17 Thymidylate_kin 6PF2K AAA_24 cobW AAA_5 TsaE Mg_chelatase AAA_18 AAA_14 NACHT ATP_bind_1 AAA_28 ArsA_ATPase
Other DBs
NCBI-ProteinID: AIZ31831
UniProt: A0AAI8K8Q1
LinkDB
Position
412266..413642
AA seq 458 aa
MFENLTDRLSQTLRHVTGKAKLTEENIKDTLREVRMALLEADVALPVVKDFVNSIKERAV
GTEVSRSLTPGQAFVKIVQAELESLMGAANEDLALNAAPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKSVMVVSADVYRPAAIKQLETLANDIGVTFFPSDISQKPVDIAEAAIREAK
IKFIDVVILDTAGRLHIDADMMDEIKALHAAVKPVETLFVVDAMTGQDAANTAKAFGEAL
PLTGVVLTKVDGDARGGAALSVRAITGKPIKFIGMGEKSEALEPFHPDRIASRILGMGDV
LSLIEQAEQNIDKAKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLSQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDLISGSRKRRIAMGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGLGGMLPGGGMPKL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgttcgaaaacctgaccgaccgtctgtcacagacgctgcgccatgtcaccggcaaggcc
aagctgaccgaagagaacatcaaggacaccctgcgcgaagtgcgcatggccctgctcgag
gccgatgtcgccctgccggtggtcaaggacttcgtcaacagcatcaaggagcgtgcagtc
ggcaccgaagtgtcgcgcagcctcaccccgggccaggctttcgtgaagatcgtccaggcc
gagctcgaaagcctgatgggcgcggccaacgaagacctggcgctcaatgcagccccgccg
gccgtggtgctgatggccggtctgcaaggtgcgggcaagaccactactgccggcaagctg
gcgcgctttctcaaggagcgcaagaagaagagcgtgatggtggtgtccgccgacgtctac
cgtcccgcggcgatcaagcagctcgaaaccctggccaacgacatcggcgtgaccttcttc
ccgtccgatatcagccagaagccggtggatatcgccgaggcggcgattcgcgaagccaag
atcaagttcatcgacgtggtcattctcgacaccgccggtcgtctgcacatcgacgccgac
atgatggatgagatcaaggccctgcatgccgcggtcaagccggtggaaaccctgttcgtg
gtcgacgccatgaccggccaggacgccgccaacaccgccaaggcgttcggcgaagcgcta
ccgctgaccggcgtggtgctgaccaaggtcgacggtgacgcccgcggcggtgccgcgctg
tcggtgcgtgccattaccggcaagccgatcaagttcatcggcatgggcgagaagagcgaa
gcgctcgagccgttccaccccgaccgcatcgcttcgcgcatcctcggtatgggcgatgtg
cttagcctgatcgagcaggccgagcagaacatcgacaaggccaaggccgacaaactcgcc
aagaagctgaagaagggcaagggcttcgacctcgaagacttccgcgaccagctgcagcag
atgaagaacatgggcggcctgggcggcttgatggacaagctgccgagcatcggcggggtc
aatctgtcgcagatgggcaatgcccagggcgcggccgagaagcagttcaagcagatggag
gcgatcatcaactccatgaccccggccgagcgccgcgatcccgacctgatcagcgggtcg
cgcaagcgccgcatcgccatgggttccggcacccaggtgcaggacatcggtcggctgatc
aagcagcacaagcagatgcagaagatgatgaagaaattctccgccaaaggcggcatggcc
aagatgatgcgcggcctgggcgggatgctgcccggtggcggcatgccgaaactgtaa

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