KEGG   Pseudomonas parafulva: NJ69_02135
Entry
NJ69_02135        CDS       T03520                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ppv  Pseudomonas parafulva
Pathway
ppv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ppv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    NJ69_02135 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppv03019]
    NJ69_02135 (rnc)
   03009 Ribosome biogenesis [BR:ppv03009]
    NJ69_02135 (rnc)
   03036 Chromosome and associated proteins [BR:ppv03036]
    NJ69_02135 (rnc)
Enzymes [BR:ppv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     NJ69_02135 (rnc)
Messenger RNA biogenesis [BR:ppv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NJ69_02135 (rnc)
Ribosome biogenesis [BR:ppv03009]
 Eukaryotic type
  90S particles
   RNase
    NJ69_02135 (rnc)
 Prokaryotic type
  rRNA processing factors
   NJ69_02135 (rnc)
Chromosome and associated proteins [BR:ppv03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     NJ69_02135 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase
Other DBs
NCBI-ProteinID: AIZ31896
UniProt: A0AAI8KA25
LinkDB
Position
480184..480873
AA seq 229 aa
MSASLERLERKLGYTFRDREQMLLALTHRSYAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMQTARERILAWLAGEFDGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
atgagcgcttccctcgagcgcctcgagcgcaagctcggctacaccttcagggaccgggag
cagatgctcttggcgctgacgcatcgcagctatgccgggcgcaacaacgagcgcctggag
tttcttggcgatgccattctcaacttcgtggctggcgaagcgctgttcgagcgtttcccc
caagctcgagaaggccagctttcgcgcctgcgcgctcgcctggtcaagggtgaaacactg
gcccgtctggcacgcggcttcgacttgggcgagtacctgcgcctgggttcgggcgagctc
aagagcggcggcttccggcgtgagtcgatcctggccgatgccctcgaagccctgatcggc
gccatctacctggacgccgacatgcagaccgcccgcgagcgcatcctcgcctggctggcg
ggcgagttcgacggcctgaccctggtcgataccaacaaagatcccaagacccgcctgcag
gagttcctgcaatcgcgtgcctgcgagttgccgcgctacgaagtggtggacatccagggc
gaaccgcactgccgtacgttcttcgtcgaatgcgaagtggtgctgctgaacaacaagagc
cgtggacagggcgttagccggcgtatcgccgagcaagtcgctgccgccgccgcactgatc
gccctgggcgtggagaatggcaatgactga

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