Pseudomonas parafulva: NJ69_02135
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Entry
NJ69_02135 CDS
T03520
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NJ69_02135 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppv03019
]
NJ69_02135 (rnc)
03009 Ribosome biogenesis [BR:
ppv03009
]
NJ69_02135 (rnc)
03036 Chromosome and associated proteins [BR:
ppv03036
]
NJ69_02135 (rnc)
Enzymes [BR:
ppv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NJ69_02135 (rnc)
Messenger RNA biogenesis [BR:
ppv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NJ69_02135 (rnc)
Ribosome biogenesis [BR:
ppv03009
]
Eukaryotic type
90S particles
RNase
NJ69_02135 (rnc)
Prokaryotic type
rRNA processing factors
NJ69_02135 (rnc)
Chromosome and associated proteins [BR:
ppv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NJ69_02135 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AIZ31896
UniProt:
A0AAI8KA25
LinkDB
All DBs
Position
480184..480873
Genome browser
AA seq
229 aa
AA seq
DB search
MSASLERLERKLGYTFRDREQMLLALTHRSYAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMQTARERILAWLAGEFDGLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcttccctcgagcgcctcgagcgcaagctcggctacaccttcagggaccgggag
cagatgctcttggcgctgacgcatcgcagctatgccgggcgcaacaacgagcgcctggag
tttcttggcgatgccattctcaacttcgtggctggcgaagcgctgttcgagcgtttcccc
caagctcgagaaggccagctttcgcgcctgcgcgctcgcctggtcaagggtgaaacactg
gcccgtctggcacgcggcttcgacttgggcgagtacctgcgcctgggttcgggcgagctc
aagagcggcggcttccggcgtgagtcgatcctggccgatgccctcgaagccctgatcggc
gccatctacctggacgccgacatgcagaccgcccgcgagcgcatcctcgcctggctggcg
ggcgagttcgacggcctgaccctggtcgataccaacaaagatcccaagacccgcctgcag
gagttcctgcaatcgcgtgcctgcgagttgccgcgctacgaagtggtggacatccagggc
gaaccgcactgccgtacgttcttcgtcgaatgcgaagtggtgctgctgaacaacaagagc
cgtggacagggcgttagccggcgtatcgccgagcaagtcgctgccgccgccgcactgatc
gccctgggcgtggagaatggcaatgactga
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