KEGG   Pseudomonas parafulva: NJ69_02420
Entry
NJ69_02420        CDS       T03520                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ppv  Pseudomonas parafulva
Brite
KEGG Orthology (KO) [BR:ppv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppv03400]
    NJ69_02420
Enzymes [BR:ppv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NJ69_02420
    5.6.2.6  RNA 3'-5' helicase
     NJ69_02420
DNA repair and recombination proteins [BR:ppv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NJ69_02420
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AIZ31952
LinkDB
Position
complement(546991..549441)
AA seq 816 aa
MPTSPDLANAWFSSRRWKPFAFQRTVWAAIERGESGLLHASTGSGKTYAVWLGALRAFAR
PVSGRHPAPLQVLWITPMRALASDTARALQAPVDELALPWSIGVRSGDTSSAERARQTRR
LPSALVTTPESLTLLLTREHAERDFAELRMIVVDEWHELLGNKRGVQLQLALARLRRWQP
QLVVWGLSATLGNLPHALEVLLPGGGRLVQGRQDKRIQVDTLLPDEIERFPWAGHMGLKM
LTKVSAELEASASSLVFTNTRAQAELWYQALLDARPDWAGLIALHHASLARHTRDWVERS
LKQGTLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLLQRAGRSGHAPGRTSRITLVP
THSLELVEAAAARQALAAGHIEARRSPRLSMDVLVQHVVSMALGSGFRPEQLLEEVRSTW
AFQDLQDAQWQWALAFVRHGGSSLTAYPDYQRVEAHPDGLWRVASERLARRHRLGIGTIV
SDASLQLKYWSKGGGGKSLGSVEESFIARLKPGDTLLFGGRILELVRVENMTAYVRRSTA
RKAAVARWNGGRMPLSSELADALVERLDAAAHGHYEGPEMRAVRPLLALQASWSALPTQR
TLLAETLHTRQGWHLFVYPFAGRMANLGLANLLAWRVSRQQPLSVSIAVNDYGFELLAAS
AVDWAAYLPAALTVDDLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQKSTRQIQ
ASSGLFYEVFRKHDADNLLLGQARDEVLMEELEIERLSHQLQKLAGLSLDLHALQRPSPL
AFALLIEGMRETLSTEKLADRIARMVADLEKAASRP
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgcccacctcacccgacctcgccaacgcctggttcagcagccgacgctggaagcccttc
gccttccagcgcaccgtgtgggcagcgattgagcgcggcgaatcgggcctgctgcatgcc
agtaccggcagcggcaagacctacgccgtctggttgggtgccctgcgagccttcgcccgt
cctgtgagtggacgtcatccggcgccgctgcaggtgttatggatcacgcccatgcgtgcg
ctggccagtgataccgcccgcgccttgcaggcaccggtcgatgagttggcgctgccttgg
agcatcggcgtgcgcagcggtgacacgtccagcgccgagcgcgcacggcagactcgacgc
ctgcccagtgcgctggtgaccaccccggaaagcctgaccttgctgctcacccgtgaacac
gccgagcgcgactttgccgaactgcgcatgatcgtggtggatgagtggcatgaactgctg
ggcaacaagcgtggcgtgcagttgcaactggccctggctcgcctgcggcgctggcagcca
cagttggtggtctggggcctgtcggccactttgggcaacctgccgcacgcgctggaggtg
ctgctgcctggcggcggacgtctggtgcaagggcgccaggacaaacgcatccaggtcgat
accttgctgccggacgaaatcgagcgattcccttgggctgggcacatggggttgaagatg
ctgaccaaggtcagcgccgagctcgaggccagcgccagcagcctggtgttcaccaatacc
cgcgcccaggccgaattgtggtaccaggcgctgctcgatgcccgccccgactgggcaggc
ctgatcgcgctgcaccacgcgtcgctggcccggcacacccgcgactgggtggagcgcagc
ctcaagcaggggacgctgaaagcggtgatctgcacctcgagcctggacttgggggtggat
ttcctgccagtcgaacgggtgctgcagatcggttcggccaaaggcatcgcgcgcctgctg
cagcgtgccgggcggtcgggacacgcgccaggcaggacgtcccgcatcaccttggtaccg
acccacagcctggaactggtggaggccgccgcggctcgacaggccttggcggccgggcac
atcgaggcgcgtcgctcgccgcggctgagtatggacgtgctggtccagcacgtggtcagc
atggcgctgggcagcgggttccggcctgagcagttactcgaagaggtgcgcagcacctgg
gcctttcaggacttgcaggacgcccagtggcagtgggcactggccttcgtgcgccatggc
ggcagctcgctgacggcctacccggattaccaacgcgtcgaagctcaccccgatggcctc
tggcgcgtggccagcgagcgtctggcacgccgccatcgcttaggcatcggcaccatcgtc
agcgatgccagcctgcaactgaaatactggagcaaaggcggaggcggcaagtcgctgggc
agcgtcgaagaatcgttcatcgcccgtctcaagcctggcgataccctgctgttcggcggg
cgcatcctggagctggtacgggtggaaaacatgaccgcctacgtgcgtcgcagcacggcg
cgcaaagcggcggtggcacgctggaatggggggcgcatgccgctgtccagcgagctggcc
gatgccctggtcgagcgcctggatgccgcggcccatggccattacgagggcccggaaatg
cgcgcggtgcgtcccctgctggcgcttcaggccagttggtcggcgctgcccacgcaacgc
accttgctcgccgagacgctgcatacgcgccagggctggcacttgttcgtctatcccttc
gccgggcgcatggccaacctgggactggccaatctgctcgcttggcgggtcagccggcag
cagccgctgtcggtctcgatcgccgtcaacgactatggcttcgaattgctggccgccagc
gcggtggactgggcagcgtatctgcccgccgcgctgacggtcgatgatctgctcgaggat
gtgcttgccagcttgaatgcgggggagatggcgctgcggcgttttcgagaaatcgcccag
atcgccggcctggtctttggcggctacccggcagcgcagaaaagtacccgtcagatccaa
gcgtccagcggtctgttctacgaagtgttccgcaagcatgatgcggataacctgctgctg
ggccaggcgcgtgatgaggtgctgatggaagaactggaaatcgagcggctgagtcaccaa
ttgcagaaactggcaggcctgagcctggacctgcatgcattgcaacggcccagcccactg
gctttcgcactgctgatcgaagggatgcgcgagaccctgagcaccgaaaagctcgccgat
cgtatcgcgcggatggtggccgacctggagaaggcggcgagccgaccgtga

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