Pseudomonas parafulva: NJ69_03815
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Entry
NJ69_03815 CDS
T03520
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NJ69_03815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_03815
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NJ69_03815
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NJ69_03815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AIZ32201
LinkDB
All DBs
Position
854974..856989
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRLMVEGLEAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTM
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHIDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAVDGIKQELSERLEYLNKANKLVESQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPSGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWESVSPQTIFVSATPGPYEEAHAGRVVEQVVRPTGLVDPE
VEIRPALTQVDDLLSEIGKRVAAGERVLATTLTKRMAEDLSDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADQITGSMQRAIDETERRRTKQVAFNEANGIVPKGVVKDITDILEGATV
PGARSKKRKGMAKAAEEAARYEAELKTPGEITKRIKVLEEKMFQMARDLEFEAAAQLRDE
IGQLRARLISS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacgcgcttccagccggccggtgatcagcccgaggccatt
cgtctgatggtcgaggggctggaggcggggctgtcgcaccagacgctgctcggcgtcacc
ggctctggcaaaaccttcagcatcgccaacgtcatccagcaggtgcagcgtccaaccatg
gtcctggcgcccaataaaacgttggcagcccagctgtatggtgagttcaaggcgtttttc
ccgaacaacgcggtcgaatacttcgtttcttattacgactactaccagcccgaagcctat
gtgccgtcttcggacaccttcatcgagaaagatgcgtcgatcaacgaccacatcgaacag
atgcgcctgtcggcgaccaaggccctgctcgagcgacgcgacgcgatcatcgttacgacg
gtgtcctgcatctatggtctgggcagcccggaaacctacctgaagatggtgctgcacatc
gaccgcggcgacaagctcgatcagcgcgcgttgctacgccggctggctgacctgcagtac
acccgcaacgagatggattttgcccgtgcgacgttccgtgtcaggggtgatgtgatcgat
attttcccggctgaatcggacctcgaagccattcgtatcgagctgttcgatgacgaggtg
gagaacatcgccgctttcgatccgctcaccggcgaggtcattcgcaagctgccgcgtttc
acgttctatcccaagagccattatgtgacccctcgggaaacgctgctcgacgcggtcgat
ggcatcaagcaggagctcagcgagcgcctggagtatctgaacaaggccaacaagctggtg
gagtcacagcgcctcgaacagcgtactcgtttcgacctggagatgattctcgaactgggc
tattgcaacggtatcgaaaactactcccgctacctctccggtcgcccatcgggggctccg
ccgcccacgctttatgactatctgccggccgatgccctgttggtcatcgacgaatcccac
gttagcgtgccccaggtcggggccatgtacaaaggcgaccgttcgcgcaaggaaaccctg
gtggagtacggttttcggctgccttctgcgctggacaaccgacctatgcgtttcgacgag
tgggagtcggtcagcccgcagaccatattcgtttctgcgacacccgggccctacgaagag
gcgcacgccggccgagtggtcgaacaggtggtgcgcccgaccggcctggtcgaccccgag
gtcgagattcggccggccttgactcaggtcgatgatctgttatccgagatcggcaagcgt
gtggcagccggtgagcgagtgctcgccacgaccttgaccaagcgcatggccgaagacctg
agtgactatctggccgatcacggcgtgcgcgttcgctatctgcactcggacatcgacacc
gtggaacgcgttgaaatcatccgcgatctgcgtcttggaaccttcgatgtgctggtgggc
atcaacctgctgcgcgaaggtctggacatgcccgaggtatcgctggtagcgatcctcgac
gccgacaaggagggcttcctgcgctccgagcgttcactcatccagaccattggccgtgcg
gcgcgaaacctgaacggcaaggccatcctgtacgccgatcagatcaccggatccatgcag
cgggcgatcgacgagaccgagcggcgccgtacaaagcaggtggccttcaacgaagccaac
ggcatcgtgcccaagggtgtggtcaaagacatcactgacatccttgagggcgccacggta
ccgggcgcgcgcagcaagaagcgcaaaggaatggccaaggcggcggaggaggctgcgcgt
tacgaggccgaactcaagacgcctggcgaaatcaccaagcgcatcaaggtgttggaagag
aagatgttccagatggcgcgcgacctcgaattcgaagccgccgcacagttgcgcgacgag
attggacagctgcgtgcacggttgatcagcagttga
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integrated database retrieval system
