Pseudomonas parafulva: NJ69_04070
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Entry
NJ69_04070 CDS
T03520
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppv
Pseudomonas parafulva
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_04070
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NJ69_04070
Archaeal homologous recombinant proteins
NJ69_04070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
nSTAND3
ABC_tran
MMR_HSR1
cobW
AAA_22
RsgA_GTPase
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AIZ32241
UniProt:
A0A0A7JIM0
LinkDB
All DBs
Position
complement(908594..912238)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPVDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LEPIGREAKVPDADGEIPTSDPRNLLRRGTGSGFAEVDFVGIDGQRYRARWEANRARDKA
TGKLQQSRHSLYDLDGEQLLASGKQEYKSLVEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DRERSELLEKLTNTAIYTRLGQRAFSRTREAADALKTLEEQASHLLPLAADARAELDRQL
EQALLQFKAEQANERQLEQQCAWLAEQQRLQAQRQEVVEALQAAEQASEQLGEQRLDLQR
LERLAPQRHQFQRQHALGAQLAPLAAEMAEQTRQQADLHARLGEQEQAQLAAREALAQQQ
AQQAEQAPRLRQAFAAQHELARLDQDLEKQQSLCQDAEQRLVEGQQHLEQVQEHQQRSLA
QLALIDTTLAESQHLSGLADAWQAYLPQVRQVVQIGARLAQGREELPGLQAQASQATAQV
QSQRDSLELLFREAKAEPEALAEQIDLLGGMLQDNRKQQRAVEELSRLHGRERELSQQRD
GLRERQQQAMQQRQQLIAQGTAAKAELDTAEQALALTRQLLERQRQARHSSVEALRSQLR
EGEACPVCGSAEHPFHQPEALLQSLGQHDKVEEEAAQQQVATLTQQLVELRTQLGVVNAQ
LKDLQQQHLHLDEQLQPLAAQLQAHSLWPALAPQDDPARSAWLDSQLRRLETEIGRDEQR
QSALLTLQKDAARLTQQMQAAQQAQQQAQRHLEQQHQALDNDEQQLRQGLTDLASVLPED
VLKALSDDPTHAFVALDQQISLRLQQQTQRQEEQQEQQARQAQLDKLHDHHQTQAQALEQ
LQQQRAALDAQRQQAHAELSELLGEQPSAEAWQQHGDTQLEQARALDSETAQQLHALRTQ
DVQLAGELKANTARQQALEQERHALDSQIADWRAEHPQLDDAGLQRLLAIDDAEVSALRQ
RLQQAEKAVEQARVLLQEREQRLQQHNASGAVQASIEDLQQRLVALREHLNAQEQQCAEL
RARQADDQRRQQAHQALADAIEQARHEWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANQQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctggccatccgcctgaagaacctggcctccctggccggccccgtggacatc
gacttcaccgccgagcccctggccagcgctggcctgttcgccatcaccgggccgaccggc
gccggcaagagcaccttgctcgatgccctgtgcctggcgctgttcggcacggtgccgcgg
ctcgaaccgatcggtcgcgaagccaaggtgcccgacgccgacggcgagattcccacgtcc
gacccgcgcaacctgctgcggcgtggcaccggcagcggctttgccgaggtcgatttcgtc
ggcatcgacggccagcgctaccgcgcccgctgggaggccaaccgcgcccgcgacaaggcc
accggcaaactgcagcagagccgccatagcctctatgacctggacggcgagcaactgctg
gccagcggcaagcaggaatacaagtcgctggtcgaggcgcgcctggggctgaacttcgaa
cagttcacccgcgcggtgatgctggcccagagcgaattcggcgccttcctcaaggccgac
gaccgtgagcgcagcgagctgctggaaaaactcaccaacacggcgatctacacccgcctt
ggccagcgcgccttcagccgcacccgcgaagcggccgacgcgctcaagaccctggaagag
caggccagccatctgctaccgctggcggccgacgcacgcgccgagctggatcgacagctc
gaacaggctttgctgcagttcaaggccgagcaagccaacgaacggcagttggagcagcaa
tgcgcctggctggccgagcagcagcgcttacaggcgcaacgccaggaagtggtcgaagca
ctccaggccgccgagcaggccagcgagcagttgggcgaacagcgtctggacctgcagcgc
ctcgagcggctggcgccgcagcgtcatcagttccagcgtcagcacgccctgggcgcccag
ctcgcgccgctggcggccgagatggccgagcagacgcgtcagcaggccgacctgcacgcc
cgcctcggcgagcaggagcaggctcagctcgcggcgcgcgaagccctcgcgcaacagcaa
gcgcagcaggccgaacaggccccgcgcctgcgtcaggcgttcgccgcccagcacgaactg
gcgcgcctggaccaggacctggagaaacagcagtcgctctgccaggacgccgaacagcgt
ctggtcgagggccagcaacaccttgagcaggtgcaagaacaccagcagcgtagcctggcg
cagttggcgctgatcgacaccactctggccgagagccagcatttgtccgggctggccgac
gcctggcaggcgtacctgccgcaagtgcgtcaggtggtgcagatcggcgcccgcctggcc
cagggccgcgaagagttgcccggtcttcaggcccaggccagccaggccactgcgcaggta
cagagccagcgcgacagcctcgaactgctgttccgcgaagccaaggccgagcccgaggca
ctggccgagcagatcgatctgctcggcggcatgcttcaggacaatcgcaaacagcagcgt
gccgtggaggaactgtcgcgcctgcacggccgcgagcgcgagttgagccagcaacgcgat
gggctgcgcgaacgccagcagcaggccatgcagcagcgccagcagttgatcgcccagggc
accgccgccaaagccgaactggacaccgccgagcaggccttggcgctgacccggcaattg
ctggagcgccagcgtcaggcgcgccacagcagtgtcgaagcgctgcgcagtcagttgcgc
gagggcgaagcctgtccggtctgcggcagcgccgagcatccgtttcaccagcccgaggcg
ctgttgcagagccttggacagcacgacaaggtcgaagaagaagcggcgcaacaacaggtc
gcgacgctcacccagcaactggtggagttgcgcacccagctcggcgtagtcaacgcccag
ctcaaggacctccagcagcaacacctgcacttggacgaacagttgcaaccgctggcggcc
cagttgcaggcccacagcctgtggccagcgctggcgccccaggacgacccggcccgcagc
gcctggctcgacagccaattgcgccggctggagacggaaatcggccgggacgagcagcgc
cagagcgccctgctcacgctgcaaaaagatgccgcgcgcctgacccagcagatgcaggcg
gcgcagcaggcccagcagcaggcccagcgccatctggagcagcagcaccaggccctggat
aacgacgagcaacaactgcggcaaggcctgacggacttggccagcgtgctgcccgaagac
gtgctcaaagccctcagcgatgaccccacccacgccttcgtcgccctcgaccagcagatc
agcctgcgcctgcaacagcagacccagcgccaggaagaacaacaggagcagcaggcccgc
caagcgcaactggacaagttgcacgatcaccaccaaacccaggcccaggcgctggaacag
ttgcagcagcaacgcgcagcgctcgatgcccagcgtcagcaggcgcacgccgagctgtcc
gaactactcggcgagcagcccagcgccgaagcctggcagcagcatggcgacacccagctc
gaacaggcccgggcactcgacagcgagacggcgcagcagcttcacgcgctgcgtacccag
gacgtgcaactggccggcgaactcaaggccaacaccgcccgtcagcaggcgctggagcag
gaacggcacgccttggacagccagatcgccgactggcgcgccgagcatccgcaactcgac
gacgctgggttgcaacgcttgctggccatcgacgacgccgaggtcagcgcgctgcgtcag
cgcctgcagcaggccgagaaagcggtcgaacaggcccgggtgctgttgcaggagcgcgag
cagcgcctgcaacagcacaacgcctcgggtgcggtccaggcgtcgatcgaagacctgcaa
caacgcctggtcgcgctgcgggaacacctcaacgcccaggaacagcagtgcgccgaactg
cgcgcccgccaggccgacgaccaacgccgccagcaggcgcatcaggccttggccgacgcc
atcgagcaggcccgccacgaatggcaacgctgggcgcgcctgaacgcactgatcggctcg
gcctccggcgatgtgttccgcaagatcgcccagggctacaacctcgacctgctgctgcac
cacgccaaccagcagttgcgccaactggcccggcgctaccgcctcaagcgcggcggcagc
gccctcggcctgttggtgctggacacggaaatgggcgacgaactgcgctcggtgcattcg
ctgtccggcggcgagaccttcctggtgtcgctggccctggccctgggcctggcgtccatg
gcctcgagcaccctgcgcatcgagtcgctgttcatcgacgaaggcttcggcagcctcgac
ccggaatcgctgcaattggccatggacgcgctggacggcttgcaggcccagggccgcaag
gtcgcggtgatctcccacgtgcaggaaatgcacgagcggatccccgtgcaaatccaggtg
cgccgccaaggcaacggcttgagcgatgtcgaggtctgcgggtga
DBGET
integrated database retrieval system
