Pseudomonas parafulva: NJ69_04245
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Entry
NJ69_04245 CDS
T03520
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03030
DNA replication
ppv03430
Mismatch repair
ppv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NJ69_04245
03430 Mismatch repair
NJ69_04245
03440 Homologous recombination
NJ69_04245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppv03032
]
NJ69_04245
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_04245
Enzymes [BR:
ppv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NJ69_04245
DNA replication proteins [BR:
ppv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NJ69_04245
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NJ69_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
AAA_16
TIP49
AAA_18
PIF1
AAA_30
AAA_2
AAA_19
TsaE
nSTAND3
DUF3646
AAA_7
Rad17
Herpes_Helicase
zf-CXXC
HasA
SKI
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AIZ32274
LinkDB
All DBs
Position
954205..956238
Genome browser
AA seq
677 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMSP
ERVVEHLSHVLEAENVPFEQDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVYGVLQALLEGDARALLEAVRELAEQGPDWRGVLAEMLNVLHRVAIAQALPE
AVDNGQGDRDKVLALAAALPAEDVQFYYQMGLIGRRDLPLAPEPRGGFEMVLLRMLAFRP
ADADDAPKPVLKPVGISQATADPAQPVATVAVAEAPAPVVEPAPAPAVEAPLPAEPAVPV
QAEPVAQDEPDVEPADEHAVEEVIDLPWEAAVAPEPQAPAPVAAPAPVQPPRGQPDYDEP
PFDPGAYASVGMERDDDGPDDDYYAPEADPASFTYLDELAEHVHEAEPLTPPEPLPAAQP
ATGLALQWLELFPHLPVSGMTGNIAANCTLIRAEGDDWLLHLDPGQGALFNSTQQRRLNE
ALNQHLGRSLRLQIELIRPEQETPAQAAARKRAERQHDAEVSIEQDPLVQQMIQRFGARV
RHDTIEPVETAQASPGQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcggccgcgctcgttccgcgagatggtcggg
cagacccatgtgctcaaggcattgatcaacgccctggacaaccagcgcctgcaccacgcc
tatctgttcaccggcacgcgcggcgtgggcaagaccaccatcgcgcggatcatcgccaag
tgcctgaactgcgaaaccggcatcacctccaccccctgcggcacctgttcggtgtgtcgc
gaaatcgacgagggccgcttcgtcgacctgatcgagatcgacgccgccagccgcaccaag
gtcgaggatacccgcgaactgctcgacaacgtgcagtacgcaccgagccgcgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccattccttcaatgccttgctc
aagacgctggaggagccgccgccctacgtcaagttcatcctcgccaccaccgatccgcag
aagctgccggcgaccatcctgtcgcgctgcttgcagttctcgctgaagaacatgagcccg
gagcgggtggtcgagcacttgagccacgtgctcgaggccgaaaacgtgccgttcgagcag
gacgccttgtggctgctcggccgcgccgccgacggttcgatgcgcgatgccatgagcctg
accgaccaggccatcgccttcggcgagggcaaggtgctggccgccgacgtgcgggcgatg
ctgggcacgctggatcatggtcaggtctacggcgtgcttcaggcgctgctcgaaggcgac
gcccgcgcgctgctggaggcagtgcgcgagctggccgagcagggcccggactggagaggc
gtgctggccgagatgctcaatgtgctgcaccgggtggccatcgcccaggcgctgcccgag
gcggtggacaacggccagggcgaccgtgacaaggtgctggccctggccgccgcgctgccg
gccgaggacgtgcagttctattaccagatgggcctgatcggccgacgtgacctgcccctg
gcaccggagccgcgcggcggcttcgagatggtcctgctgcgcatgctggcgttccgtccg
gctgatgccgacgacgccccgaaaccggtgctaaagccggtggggatcagccaggccaca
gctgatcccgcccagccggtggcgacggtggcggttgccgaggcgcctgcgccggtcgtc
gagccggccccggcgccggccgtcgaagcgccgctgcccgccgagcctgcggtaccggtg
caagccgaacccgtcgcccaggacgaacctgacgtcgagcccgccgatgaacacgctgtc
gaggaggtgatcgacctgccgtgggaagcggccgtggcgcctgagccccaagcgcctgcg
cctgtcgcggctcccgccccggtccaaccgccgcgtggccagcctgattacgacgagccg
cccttcgatccaggcgcctatgcgtcggtcgggatggaacgcgacgacgacggcccggat
gacgactactacgcgcccgaagccgaccccgccagcttcacctacctggacgagctggcc
gagcacgtgcacgaagccgaaccgctcaccccgcccgagccgctgccagcggcccagccg
gccaccgggctagccctgcagtggctggaattattcccgcacttgccggtctcgggtatg
acaggcaacatcgccgcgaactgcacgctgatccgcgccgaaggcgacgactggctgctg
cacctggacccggggcagggcgcgctgttcaacagtacccagcaacggcgcctgaacgaa
gcgctcaaccagcacctggggcgcagcctgcgcctgcagatcgagctgattcgccccgag
caggaaaccccagcccaggccgccgcgcgcaagcgcgccgagcgtcagcacgacgccgag
gtgtcgatcgagcaagacccgctggtccagcagatgatccagcggttcggcgcacgcgtg
cgccacgatacaatcgaacccgtggagaccgcccaggccagtcctgggcagtga
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