Pseudomonas parafulva: NJ69_04975
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Entry
NJ69_04975 CDS
T03520
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NJ69_04975 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_04975 (uvrC)
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NJ69_04975 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH
HHH_2
HHH_3
GIY_YIG_2
5_3_exonuc
DUF3780
Motif
Other DBs
NCBI-ProteinID:
AIZ32406
UniProt:
A0A0A7JJ35
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Position
1130985..1132808
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AA seq
607 aa
AA seq
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MSQLFDASAFLATCSGRPGVYRMFDAESRLLYVGKAKNLKKRLASYFRKAGLAPKTAALV
ARIAQVETTITANETAALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRLGIHRG
AKKAKGRYFGPYPSAGAIRESLGLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKAPCVG
LVEPGDYAEDVRHSVMFLEGRSQQLGNELNAEMEQAAMALNFEKAAELRDQIALLRRVQD
QQHMEGGSGDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVSEVMAAFLS
QYYVGNAERELPSELIVNVVHEDFEAIIEAVQSLRGRELSISHRVRGTRARWQQLAVTNA
EQALNARLANRQHMAARFDALAQVLDLPEVPQRLECYDISHSSGEATVASCVVFGPEGPI
KSDYRRFNIEGVTAGDDYAAMQQALTRRFGRIKDGEGKLPDVLLVDGGKGQLNMAREVMQ
SLAFTDLTLLGVAKGVTRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITG
HRARRGKARRTSSLEDVAGVGPKRRRDLLKHFGGLQELNRASADEIAKAPGISKKLAESI
YASLHSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaactctttgatgccagcgcgttcctggcgacctgcagtggtcgcccgggcgtg
taccgaatgttcgacgccgagtcgcggctgctctatgtgggcaaggcgaaaaacctcaag
aaacgtctggccagctatttccgcaaagctggcctggcgccgaagacggctgccctggtg
gcgcgcattgcccaagtcgaaaccaccatcactgcaaacgaaactgcagcgcttctgctg
gagcagacgctgatcaaggaatggcgtccgccctacaacatcctgctgcgcgacgataag
tcctatccctatgtgtttttgtccgatggcgagtttccgcgcctgggcattcaccggggt
gccaagaaggccaagggccgctactttgggccctatcccagtgctggggcgatccgcgaa
agcctgggtctgttgcagaaggccttttcggtgcgccaatgcgaggacagttactacgcc
aaccgaactcgcccctgcttgcagtaccagatcaagcgttgcaaggcgccgtgcgtgggt
ttggtcgagcccggtgactatgccgaagacgtgcgccattcggtaatgttcctcgagggc
cgcagccagcaattgggcaacgagctcaatgccgagatggagcaggccgctatggcactg
aacttcgagaaggctgccgagttgcgtgatcagatcgcgctgttgcgccgcgttcaggac
cagcagcatatggaaggcggttcaggcgatgtcgacgtggtcgccgccttcgtcaacccg
ggcggcgcctgcgtccatctgatcagtgtgcgcggcgggcgggtgttgggcagcaagaat
ttcttcccgcaggtgggtatcgaggaggaagtttcagaagtgatggccgcgttcctgtcg
cagtactacgtcggcaacgccgagcgcgaactgcccagcgaactgatcgtcaacgtggtg
catgaggacttcgaagcaatcatcgaagcggtgcagagcctgcgaggccgtgagctgagc
atcagccatcgggttcggggcacgcgtgcgcgctggcagcagttggcggtcaccaatgct
gagcaagcgctcaatgcccgtttggcgaaccgtcagcacatggccgcgcgcttcgacgcg
ctggcgcaggtgctggacctgccggaggtgccgcaacgcctggagtgctacgacatcagc
cattccagtggcgaagcgactgtggcgtcttgcgtggtatttggtcccgagggcccgatc
aagtctgactaccgccgtttcaacatcgaaggtgtgacggccggcgacgactatgccgcg
atgcagcaggccctgactcgccgcttcgggcgcatcaaggacggggagggtaagctgccg
gatgtactgctggtcgatggtggcaagggtcagttgaatatggcgcgagaggtcatgcag
tcattggccttcaccgacctcaccttgctcggggtggccaagggcgtgacccgcaaggcc
ggtttcgaaacgctgtatctcaacgatgcagctcacgagttcaccctcaagggtgactcg
ccggcgctgcacctgattcagcaaattcgcgacgaggctcaccgctttgccatcaccggt
caccgtgcgcgacgcggcaaggctcgccgaacgtccagcctggaggatgtggccggggtc
ggccccaagcgccgtcgcgacctgctgaaacatttcggcggcctgcaagagctgaaccgg
gccagtgccgatgagatcgccaaggcgcccggcatcagtaaaaagcttgccgagtcgatt
tatgccagcctgcatagcgagtag
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