Pseudomonas parafulva: NJ69_06390
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Entry
NJ69_06390 CDS
T03520
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv00500
Starch and sucrose metabolism
ppv01100
Metabolic pathways
ppv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NJ69_06390
Enzymes [BR:
ppv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
NJ69_06390
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
AIZ32655
LinkDB
All DBs
Position
complement(1450208..1452361)
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AA seq
717 aa
AA seq
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MTARTPKKTRSVAPTRIREGLPFPLGATWDGLGVNFALFSANATKVELCIFDASGENELE
RIELPEYTDEIYHGYLPDAHPGLVYGYRVYGPYEPQNGHRFNHNKLLIDPYAKQLVGELK
WSEALFGYTLGHPDDDLSFDERDSAPFVPKCKVVDPAFTWGRDQRVQIPWEQTVFYEAHA
RGISMRHPAVPENLRGTFAGLANDELLKHIKDLGVSSIELLPIHAFVNDQHLLDKGLNNY
WGYNSLAFFAPHPKYLASGKIAEFKEMVAHIHEKGLEVILDVVYNHTAEGNERGPTLSMR
GIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQLVTDSLRYWAGEMHVDGFRFDLA
TILGRYHDGYSERHSFLVTCRQDPLLRSVKLIAEPWDCGPGGYQVGNFAPGWAEWNDRFR
DTARAFWKGHEGQLADFAARLTGSGDLFDNRGRRPYASVNFITAHDGFTLRDLVSYNDKH
NEDNEENNQDGTSNNISWNCGVEGPTEDADIKALRMRQMRNFFATLLLSQGTPMIVAGDE
FSRTQHGNNNAYCQDSEIGWINWDLDEEGQALLAFVKRLTKLRQTYPVLRRSNFLVGDYN
EAIGVKDVTWLAPDGNEMGVEQWEDPHGRCLGMLIDGRAQVSGIARPGDQATVLLIVNAH
HDVVPFKLPSVPQGEHWSCLIDTDQPEQRKAKRLEFDSTFDVTGRSVVLMVLQREQE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacgcaccccaaagaaaacccgttccgtcgcgccaacccgcattcgtgaaggc
ctgcccttcccgctgggtgccacctgggatggactgggcgtcaacttcgccctgttctcg
gccaacgccaccaaggtcgagctgtgcatcttcgacgccagcggcgagaacgaactcgag
cgcatcgaactgccggaatacaccgacgagatttaccatggctacctgcccgatgctcac
ccaggactggtctacggctaccgcgtgtacggcccctatgagccgcagaacggccaccgc
ttcaaccacaacaagctgctcatcgacccctatgccaagcaactggtgggtgagctgaaa
tggtccgaggcattgttcggctacaccctcggccaccccgacgacgatctttcgttcgac
gagcgcgacagcgcgcccttcgtgcccaagtgcaaggtcgtggatccggcattcacctgg
ggccgcgaccagcgcgtgcagattccttgggaacagactgtgttctacgaggctcacgcg
cgcggtatcagcatgcgtcacccggcggtgccggaaaacctgcgcggcaccttcgcgggc
ctggccaacgacgagctgctcaagcacatcaaggacctgggcgtttcgagcatcgagttg
ctgccgatccacgccttcgtcaacgaccagcacctgctggacaaaggcctgaacaactac
tggggttacaacagcctggcgttcttcgcgccacaccccaagtacctggccagtggcaag
atcgccgaattcaaggagatggtcgcgcacattcacgagaagggcctggaggtgattctc
gatgtggtctacaaccacaccgccgaaggcaacgagcgtggtccgaccctgtccatgcgc
ggcatcgacaacgcctcgtattatcgcttgatgcctgacgacaagcgctactacatcaac
gattcgggcaccggcaacactctggacctgagccacccctgcgtgctgcagttggtcacc
gactcgctgcgctactgggccggcgagatgcatgtggacggcttccgcttcgacctggcg
accattctgggccgttaccacgacggttacagcgagcgccacagcttcctcgtcacctgc
cgccaggacccgttgttgcgcagcgtcaagctgatcgccgaaccctgggactgtgggcca
ggcggctaccaggtgggcaacttcgcccccggctgggccgaatggaacgaccgcttccgc
gacaccgcccgcgccttctggaaaggccacgaaggccagctggccgacttcgctgcgcgc
ctgaccggttcgggcgacctgttcgacaatcgtggtcggcgcccctatgcgtcggtcaac
ttcatcaccgcccacgacggtttcacgttgcgcgacctggtgtcgtacaacgacaagcac
aacgaggacaacgaggaaaacaaccaggacggtaccagcaacaacatctcctggaactgc
ggcgtcgaaggcccgaccgaggatgccgacatcaaggcgctgcgcatgcgtcagatgcgt
aacttcttcgccaccttgctgctgtcccagggcacgccaatgatcgtagcgggcgatgag
ttcagccgcactcagcacggcaacaacaacgcctactgccaggacagcgaaatcggctgg
atcaactgggacctggacgaggaaggccaggccctgctggccttcgtcaagcgcctgacc
aagctgcgccagacgtatccggtgctgcgccgttccaacttcctggtgggcgattacaac
gaagcgatcggtgtaaaggacgtcacctggctagcccccgacggcaacgagatgggcgtg
gagcaatgggaggatccccatggccgatgcctgggtatgctgatcgacggtcgcgcgcag
gtcagcggtatcgcccgtcctggcgaccaggccaccgtgctgctgattgtcaatgcccac
catgacgtagtgcccttcaagctgcccagcgtgccgcaaggtgagcactggagctgcctg
atcgatactgaccagccggagcagcgcaaggccaagcgcttggagttcgacagtaccttc
gatgtcaccggacgttcggtggtgttgatggtgttgcagcgcgagcaggagtga
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