Pseudomonas parafulva: NJ69_09685
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Entry
NJ69_09685 CDS
T03520
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppv
Pseudomonas parafulva
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppv03032
]
NJ69_09685
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_09685
Enzymes [BR:
ppv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NJ69_09685
DNA replication proteins [BR:
ppv03032
]
Prokaryotic type
DNA Topoisomerases
NJ69_09685
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NJ69_09685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AIZ35603
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All DBs
Position
2288067..2289080
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AA seq
337 aa
AA seq
DB search
MPEITLPRTLHYVDDTQPGLSRKRWRDRFIYLDPDGNRVRDKEVLARIAALVIPPAYTDV
WICLDPQGHLQATGRDARGRKQYRYHVQWRTLRDEHKYSRMLAFAQALPKLRRQLDVHLS
RPGMDREKVMALVVSLLDNTLIRIGNRQYLRDNKSYGLTTLRNRHVEVKGSTIRFQFRGK
RGVEHSITLRDRRLAQLVKRCMELPGQELFQYVDDSGERHRIGSADINLFLQQLTGADFT
AKDYRTWGGSTLALNLLQPLAWQPETEAKRQVTTIVREVASRLGNTPAVCRRCYIHPAVL
EHFHLGRLADLPRVRARKDMEREEVALLGFLRALEAL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatcaccctgccccgcaccctgcactacgtcgacgacactcagcccggcttg
agccgcaagcgttggcgcgatcgcttcatctacctggacccggacggtaaccgagtccgc
gacaaggaggtgctggcgcgcatcgcagccctggtgattcccccggcttacaccgatgtg
tggatctgcctggacccacagggccacctacaggccaccggccgcgatgcccgtggacgc
aagcagtaccgctaccacgtgcaatggcgaaccttgcgcgacgaacacaagtactcacgc
atgctggctttcgcccaggccttgccgaaattgcgcaggcaactggacgtgcatctgtca
cgccctggcatggatcgggaaaaagtcatggcgctggtggtcagtctgctcgacaacaca
ctgatccgtatcggcaatcgccagtatctgcgtgacaacaaatcctacggactgactacc
ctgcgcaaccgccatgtcgaggtcaagggcagcaccattcgcttccagttccgcggcaaa
cgcggggtcgagcacagcatcacgttgcgcgaccgtcgcttggctcaactggtcaagcgc
tgcatggagctgccgggccaggagctgttccagtacgtggacgacagcggcgaacgccac
cgcatcggctcagccgatatcaacctgttcctccagcaactgaccggcgccgacttcacg
gccaaggactatcgcacctggggcggcagcaccctggcgctgaatttgttgcagcccctg
gcgtggcagccggagaccgaggccaagcgccaggtcacgacgatagtgcgggaagtcgcc
agccgattgggcaatacgccagcggtctgccgccgctgctatatccaccctgcggtgctg
gagcattttcacttgggtcgcctggccgacctgccgcgcgtgcgggcacgcaaggacatg
gagcgcgaggaggtcgccttgctcggttttcttcgggcactggaggcgctatga
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