Pseudomonas parafulva: NJ69_10140
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Entry
NJ69_10140 CDS
T03520
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv00020
Citrate cycle (TCA cycle)
ppv00190
Oxidative phosphorylation
ppv00650
Butanoate metabolism
ppv00720
Other carbon fixation pathways
ppv01100
Metabolic pathways
ppv01110
Biosynthesis of secondary metabolites
ppv01120
Microbial metabolism in diverse environments
ppv01200
Carbon metabolism
Module
ppv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppv_M00149
Succinate dehydrogenase, prokaryotes
ppv_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NJ69_10140 (sdhA)
00650 Butanoate metabolism
NJ69_10140 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NJ69_10140 (sdhA)
00720 Other carbon fixation pathways
NJ69_10140 (sdhA)
Enzymes [BR:
ppv01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NJ69_10140 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
FAD_oxidored
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AIZ33317
LinkDB
All DBs
Position
complement(2396102..2397874)
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AA seq
590 aa
AA seq
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MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTETGRIYQRP
FGGQSKDFGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQDGAF
VGVIAICIETGETMYIKSKATVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITMDADGQDHIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALSDGVEYRDASDTDVDVALNRLNKLNERTSGEDVASLKRELQSCMQNYFGVFRTGE
YMQKGIEQLAGLRDRIANVKINDKSRAFNTARIEALELQNLLEVAEATAIAAEARKESRG
AHAREDFEDRDDENWLCHTLYYPGEKRVAKRGVNFAPKTVPAFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaaccatttccttcgacgccatcatcatcggtggcggcggtgctggt
atgcgcgctgcgctgcagctggctcaaggcggccacaagactgccgtagtcaccaaggtc
ttcccgacccgttcgcacaccgtatccgcccagggcggcatcacgtgcgccatcgcttcg
gccgacccgaacgatgactggcgctggcatatgtacgataccgtcaagggctccgactac
atcggtgaccaggacgctatcgaatacatgtgccaggaaggcccggctgcggtcttcgaa
ctggaccacatgggcctgccgttctcgcgtaccgaaaccggtcgtatctaccagcgccca
ttcggtggccagtccaaggacttcggcaagggtggccaggccgcgcgtacctgcgctgcg
tccgaccgtaccggtcacgccctgctgcacaccctctatcagggcaacctgaaagccggc
accactttcctcaacgagtactacgccgttgacctggtcaagaaccaggacggcgcgttc
gtcggtgtgattgcgatctgcatcgaaaccggcgaaaccatgtacatcaagtccaaggcc
accgtactggccaccggcggtgctggccgtatctacgcctccaccaccaacgccctgatc
aataccggcgacggtatcggcatggcgctgcgcgccggcgtaccggtgcaggacatcgag
atgtggcagttccacccgaccggcatcgccggcgctggtgtactggtcaccgaaggctgc
cgcggtgagggtggttacctgatcaacgcccacggcgagcgcttcatggagcgttacgcg
ccgaacgcgaaagacctggctggccgcgacgtggtcgcccgttccatggtcaaggaaatc
atcgccggcaatggcgtgggtccgaacaaggatcacgtcctgctcaagctcgatcacctg
ggcgaggaagtgctgcacagccgcctgccaggtatctgcgagctgtccaagaccttcgcc
cacgtcgacccggtggtcgcgccggtaccggtggtcccgacttgccactacatgatgggc
ggcgttgccaccaacattcatggccaggccatcaccatggacgccgacggccaggatcac
atcatcccgggtctgttcgccgtgggtgaagtggcatgcgtatcggtacacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtgttcggccgtgctgccggcctgcac
ctggaaaaagccctgagcgatggcgtcgagtaccgcgatgcgagcgacaccgatgtcgac
gtggcgctgaaccgcctgaacaagctcaacgagcgtaccagcggcgaagacgtcgccagc
ctcaagcgcgaactgcaaagctgcatgcagaactacttcggtgtattccgtactggcgaa
tacatgcagaagggtatcgagcagttggccggtctgcgtgaccgcatcgccaacgtcaag
atcaacgacaagtcccgggccttcaacaccgcgcgcatcgaagcgctggagctgcagaac
ctgctggaagtcgccgaagctaccgccatcgcggccgaagcccgtaaagagtcgcgcggc
gcacacgcccgtgaagacttcgaagaccgtgacgacgaaaactggctgtgccacaccctg
tactacccgggtgagaagcgcgtagccaagcgtggtgtcaactttgcgccgaagacagtg
cctgccttcgaaccaaaagtccggacttactaa
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