Pseudomonas parafulva: NJ69_10230
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Entry
NJ69_10230 CDS
T03520
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv00630
Glyoxylate and dicarboxylate metabolism
ppv00680
Methane metabolism
ppv01100
Metabolic pathways
ppv01120
Microbial metabolism in diverse environments
ppv01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NJ69_10230
09102 Energy metabolism
00680 Methane metabolism
NJ69_10230
Enzymes [BR:
ppv01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
NJ69_10230
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_10
Fer4_21
Fer4_9
Fer2
Fer4_18
Fer4_16
Fer4_2
Fer4_6
Fer4_4
TPP_enzyme_M
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
AIZ33334
LinkDB
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Position
complement(2413230..2416118)
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AA seq
962 aa
AA seq
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MINYFDPANSDMDLGTPARDSEVQVSLNIDGRAISVPAGTSVMRAAALLGTSIPKLCATD
TLEAFGSCRMCMVEIDGMRGYPASCTTPVSDGMVVRTQTPRLADLRRNVMELYISDHPLD
CLTCSANGNCELQTVAGQVGLREVRYGYEGANHLTEAKDVSNPYFDYEPSKCIVCSRCVR
ACEDIQGTFALTISGRGFESRVAAAGGDNFLSSECVSCGACVQACPTATLTEKSLVQIGQ
PERAVITTCAYCGVGCSFRAEMKGNQLVRMVPDKNGGANHGHACVKGRFAWGYATHPDRI
TQPMIRKRLEDPWQEVSWEEALSYAASEFRRIQLKYGRDSIGGITSSRCTNEEAYLVQKL
VRAAFGNNNVDTCARVCHSPTGYGLKQTLGESAGTQSFDSVMQADVILVIGANPTDAHPV
FGSQLKRRLRQGAKLIVVDPRRIDLVDSPHARAELHLQLRPGTNVAMLNALAHTLVSEGL
LDQAFIEARCEGADFARWREFVGLPENAPEVLGPVCGVPAEQIRAAARLYAEAGNAAIYY
GLGVTEHSQGSTAVMGIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHELPGYR
HISNETVRAEFEQAWGVTLQPDPGLRIPNMFEAALDGSFKALYCQGEDIAQSDPNTQHVT
AALMAMECVVVQDIFLNETAKFAHVFLPGSSFLEKDGTFTNAERRISRVRKVMEPMAGKA
DWEATVALANALGYRMDYRHPSEIMDEIARLTPSFHGVSYAEIESRGSLQWPCNDAAPEG
TATMHIDQFVRGKGRFMLTGYVPTDEKVNARYPLLLTTGRILSQYNVGAQTRRTHNVAWH
DEDRLEIHASDAESRGISDGDWVGVGSRAGQSVLRARVSARVAPGVVYTTFHFPESGANV
ITTDNSDWATNCPEYKVTAVEVVRVFQPSEWQKRYQHFSDEQQRLLKERRQAEGQEKAEV
RR
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgatcaactacttcgaccccgccaacagcgacatggacctgggcacgcctgcccgtgac
agcgaggtgcaggtcagcctgaacatcgacggccgtgccatcagcgtgccggccggtacg
tcggtgatgcgcgcggcggcgctgttgggcaccagcattcccaaactgtgcgccaccgat
accctggaagccttcggctcgtgccgcatgtgcatggtcgagatcgacggcatgcgcggc
tacccggcttcgtgcaccacgccggtcagcgacggcatggtggtgcgcacccagaccccg
cgcctggccgacctgcggcgcaatgtcatggagctgtacatctccgatcacccgctggac
tgcctgacctgctcggccaacggcaactgcgagctgcagaccgtcgccggccaggtaggc
ctgcgcgaggtgcgttatggctacgagggcgccaatcacctgaccgaggcgaaggacgtt
tccaacccgtacttcgactacgagccgagcaagtgcatcgtctgcagccgctgcgtgcgc
gcctgtgaagacattcaaggcaccttcgcgctgaccatcagcggccgtggcttcgaatcg
cgggtggcggcggccggtggcgacaacttcctgtcttcggagtgcgtgtcgtgcggtgcc
tgcgtccaggcctgcccgaccgcgacgctgaccgaaaagagcctggtgcagatcggtcag
ccggagcgcgcggtgatcaccacctgcgcgtattgcggcgtcggctgctcattccgggcg
gaaatgaagggcaatcagttggtgcgcatggtgccggacaagaatggcggcgccaaccat
ggccacgcctgcgtcaagggtcgtttcgcctggggctacgccacccatccggaccgcatc
acccagccaatgattcgcaagcgcctggaagatccctggcaggaagtcagctgggaggaa
gcgctgagctacgcggccagcgagttccggcgcatccagctcaagtatgggcgcgattcg
attggcggcatcacctccagccgttgcaccaacgaggaagcgtatctggtgcagaaactg
gtgcgtgctgccttcggcaataacaacgtcgacacctgcgctcgggtctgccattcgccg
accggctatggcctgaagcagaccctgggcgagtcggccggtacccaaagcttcgattcg
gtgatgcaagcggacgtgatcctggtgatcggtgccaatcctaccgatgcccacccggtg
ttcggctcccagctcaagcgtcggctgcgccagggcgccaagttgatcgtcgtcgatcca
cgccgcatcgacctggtcgattcgccccatgcccgcgccgagttgcacctgcaactgcgt
ccaggcaccaacgtggccatgctcaacgccctggcccacaccttggtcagcgaaggcctg
ctcgatcaggcgttcatcgaggcgcgctgcgaaggcgcggacttcgctcgctggcgcgaa
ttcgtcggcttgccggagaacgcgcccgaagtgctgggcccggtctgcggtgtgcccgcc
gagcagatccgtgcggcggcccggttgtacgccgaagccggtaacgcggcgatctactac
ggccttggggtcaccgagcacagccagggcagcaccgccgtgatgggcatcgccaatctg
gcgatggccaccggcaacatcggccgcgaaggcgtcggggtcaacccgctgcgcggccag
aacaacgtgcaaggctcctgcgacatgggctcgttcccccacgagttgccaggttatcgg
cacatttccaacgagaccgtgcgcgccgagttcgagcaggcctggggcgtgaccctgcag
cccgatccgggcctgcgcatccccaacatgttcgaagccgcgctcgatggcagcttcaag
gcactgtactgccagggcgaggacatcgcccagagcgacccgaacacccagcacgtcact
gccgccctgatggccatggagtgcgtggtggtgcaggacatcttcctcaacgaaaccgcc
aagttcgcccatgtattcctgccgggcagttcgttcctggaaaaggacggcaccttcacc
aacgccgagcgccgcatctcacgggtgcgcaaagtgatggagccgatggccggcaaggcc
gactgggaagccactgtggccctggccaacgccttgggttatcgcatggactaccgtcat
ccttccgagatcatggatgaaatcgcccgtctgacgcccagcttccatggcgtcagctac
gccgagatcgaaagccgcggcagcctgcagtggccctgcaacgacgcggcgcccgagggc
acggcgaccatgcacatcgatcagttcgtgcgtggcaagggccgtttcatgctcaccggc
tacgtaccgaccgacgaaaaggtcaacgcgcgctatccgctgttgctgaccaccggccgt
attctcagccagtacaacgtcggggcgcagactcggcgtacccacaacgtcgcctggcat
gacgaggaccgcctggaaatccacgccagcgatgcggaaagccgtggcatcagtgacggc
gactgggtgggcgtgggcagccgtgccggccagagtgtcctgcgcgctcgggtgagtgcg
cgggtcgcaccgggggtggtctacaccaccttccacttccccgagtccggcgccaacgtg
atcaccaccgacaactccgactgggcgaccaactgtccggagtacaaggtcactgcggtc
gaggtggtgcgcgtgttccagccgtcggagtggcagaagcgctaccagcatttcagtgac
gaacaacagcgcctgctcaaggagcggcgtcaggccgaggggcaggagaaagccgaggtg
cgtcgatga
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