Pseudomonas parafulva: NJ69_10540
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Entry
NJ69_10540 CDS
T03520
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppv
Pseudomonas parafulva
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppv01011
]
NJ69_10540
Enzymes [BR:
ppv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NJ69_10540
Peptidoglycan biosynthesis and degradation proteins [BR:
ppv01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NJ69_10540
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
AIZ33389
UniProt:
A0AAI8PC38
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Position
2487667..2489595
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AA seq
642 aa
AA seq
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MRSRLFHFVSCLVLSAATASAAHATDITQQRQYYDEAKRALAKGDKGPYLRYAQALSDYP
LTPYLAYDELTARLKTASNEEIEGFLAKHGDLPQANWMKLRWLRWLAERGDWKTFARYYD
AKLNFTELDCLNGQYQLASGQRAEGFATAEKLWNVGKSQPATCDTLFGLWAAEGQLTEAR
RWQRAKLAAEARNYSLANNLVQTLPTLGTQGKLLIDVAQKPELLKQPSRFQPASDAMSDV
VSLGLRRLARQDPDQAMALLDDYAQRMHFSRDEKVAIAREIGLTLARRYDPRALDLMTRY
DPELRDNTVSEWRMRLLLRLGRWEDAYELSRRLPQDLAGSSRWRYWQARSLELAQPNNPQ
IPLLYKNVSRERDFYGFLAADRAQTPYQLNNKPLVLSQALLNKVRNTPGVRRALEFHARG
QIVEGRREWYHVSRHFNRDEMVAQARLAYDLRWYFPAIRTISQAQYWDDLDIRFPMAHRD
TLVREAKVRGLHSSWVFAITRQESAFMDDARSPVGASGLMQLMPGTAKETARKFSIPLAS
PAQVLDPDKNIQLGAAYLSQVHGQFNGNRVLASAAYNAGPGRVRQWLKGAKHLSFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNVPQPLVDWHERYFDDM
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagccgcctgttccacttcgtttcctgcctggtgctcagcgccgccaccgcgagc
gctgcccacgccaccgacatcacccagcagcgccagtactacgacgaggccaaacgcgca
ctcgccaagggcgacaaggggccttacctgcgctatgcccaagccctgagcgactacccg
ctgaccccttacctggcctacgatgaactcaccgcacggctgaagaccgccagcaacgag
gaaatcgagggttttctcgcaaagcacggcgaccttccccaggccaactggatgaaattg
cgctggctgcgctggctggccgaacgcggcgactggaaaaccttcgcccgttattacgac
gccaaactcaatttcaccgaactggactgcctcaatggccagtaccaactagccagcggc
cagcgcgccgaaggtttcgccacggccgagaagctgtggaatgtcggcaagtcgcaaccc
gcgacctgcgataccttgttcggtctgtgggccgccgagggccagctcaccgaggcgcgg
cgctggcaacgggccaaattggcggccgaagcacgcaactacagtctggccaataacctg
gtacagaccctgcccacgctcggcacacagggaaagttgctgatcgacgtggcgcagaaa
ccggaactgctcaagcaaccttcccgcttccagccggccagtgacgccatgtccgatgtc
gtcagcctgggcctgcgtcgcctggcacgccaggatccggaccaggccatggcgctgctc
gacgactacgcccagcgcatgcacttctcacgcgatgaaaaagtcgccatcgcccgcgaa
atcggtctcaccctcgcccgccgctacgacccgcgcgcactcgacctgatgacccgctac
gacccggagctgcgcgacaacaccgtcagcgaatggcgcatgcgcctgctgctgcgcttg
ggccgctgggaggacgcctacgaactgagccgacgtctgccccaggacctggccggtagc
agccgctggcgctactggcaggcgcgcagcctggaactggcacaaccgaacaacccgcag
atcccgctgctgtacaagaacgtgtcgcgtgagcgcgacttctatggcttcctggctgcc
gatcgggcacagacgccttaccagctcaacaacaaaccgctggtgctgagccaggccctg
ctgaacaaagtgcgcaacacgcccggcgtgcgccgcgccctggaattccatgcgcgcggg
cagatcgtcgaggggcggcgcgagtggtaccacgtcagccgtcacttcaaccgcgacgag
atggtcgcccaggcgcgcctggcttacgatctgcgctggtacttcccggccatccgcacc
atcagccaggcccagtactgggacgatctggacattcgcttccccatggcccaccgcgac
accctggtgcgcgaagccaaggtccgcggcctgcattcgagctgggtgttcgccattacc
cgccaggaaagcgcgttcatggacgacgcccgctcgcccgtgggtgccagcggcctgatg
cagttgatgccaggcaccgccaaggagaccgcgcgcaagttcagcattccgctggcctcg
ccagcgcaggtactggacccggacaagaatatccagttgggcgccgcctacctcagccag
gtacatgggcagttcaacggcaaccgggtgctggcatcggctgcctacaacgccggcccg
ggccgcgtgcggcagtggctcaaaggcgccaagcacttgagtttcgatgtctgggtcgag
tcgattccattcgatgaaacccgtcagtacgtgcagaacgtcctgtcgtactcggtcatc
tacggccagaaactcaacgtaccgcaaccgttggtggactggcacgagcgctacttcgac
gacatgtaa
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