Pseudomonas parafulva: NJ69_12530
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Entry
NJ69_12530 CDS
T03520
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ppv
Pseudomonas parafulva
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppv03009
]
NJ69_12530 (rimO)
Enzymes [BR:
ppv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NJ69_12530 (rimO)
Ribosome biogenesis [BR:
ppv03009
]
Prokaryotic type
ribosomal protein modification factors
NJ69_12530 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AIZ33751
UniProt:
A0AAI8KCT7
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All DBs
Position
2924520..2925851
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AA seq
443 aa
AA seq
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MSTTPATPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYEDADVVVVNTCGFIDSAK
AESLEVIGEAIKENGKVIVTGCMGVEEGTIRDVHPSVLSVTGPQQYEQVVNAVHEVVPPR
QDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSEAE
RLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHYVY
PYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDRTLARIKQWREQCPELV
IRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLDEVPDDVKQD
RWDRFMAHQQAISSARLQLRIGKEIEVLIDEVEEQGSVGRSFFDAPEIDGSVFIDGDHGF
KPGDKVRCRIVDADEYDMWAEPI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccactcccgccacgccgaaggtcggcttcgtctccctgggttgcccgaaagcc
ctggtcgactccgagcgcatcctcacccaactgcgcatggaaggctacgaagttgtaccg
acctacgaagacgccgacgtggtggtggtcaatacctgcggcttcatcgacagcgccaag
gccgaatcgctggaagtgatcggcgaagcgatcaaggagaacggcaaggtcatcgtcacc
ggctgcatgggcgtcgaggaaggcactatccgcgacgtgcaccccagtgtgctgtcggtc
accggccctcagcagtacgagcaggtggtcaacgccgttcacgaagtggtcccgccgcgc
caggaccacaacccgctgatcgacctggtaccgcctcagggcgtcaagctgaccccgcgt
cactacgcgtacctgaagatttccgaaggctgcaaccacagctgcagtttctgcatcatt
ccctcgatgcgcggcaagctggtcagccgcccggtcggtgaagtgctgagtgaagccgag
cggctggtcaaggcgggcgtcaaggagatcctggtgatatcccaggacaccagcgcctac
ggcgtggacgtcaagtacaagaccgacttctggaacggccgcccggtcaagacgcgcatg
ctcgaactgtgcgaagccttgagcagcctgggtgcctgggtgcgcctgcactacgtgtac
ccctaccccaatgtcgacgacgtgatcccgctgatggccgccggcaagatcctgccgtac
ctggacatccccttccagcacgccagcccgaaagtgctcaaggccatgaagcgcccggcc
ttcgaggaccgcaccttggcgcgcatcaagcagtggcgtgagcagtgcccggaactggtc
atccgctcgaccttcatcgtcggtttccccggcgaaaccgaggaagacttccagtacctg
ctcgattggctcaccgaagcccagctcgaccgcgtcggctgcttccagtattcgccggtc
gaaggcgccccggccaatgacctgggcctcgacgaggtacccgacgacgtcaagcaggat
cgctgggaccgcttcatggctcaccagcaagccatcagcagcgcacgcctgcaactgcgt
atcggcaaggagatcgaggtattgatcgatgaagtcgaggagcagggttcggtcggccgc
agcttcttcgatgcgccggagatcgacggcagcgtgttcatcgacggcgatcacggcttc
aagcccggcgacaaggtgcgctgccgcatcgtcgatgccgacgagtacgacatgtgggcc
gaacccatctga
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