Pseudomonas parafulva: NJ69_12705
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Entry
NJ69_12705 CDS
T03520
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NJ69_12705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_12705
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NJ69_12705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
AIZ33782
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Position
2954335..2956905
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AA seq
856 aa
AA seq
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MSDLSAHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG
QSIPMCGIPFHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEA
LLDERRDNLIAAVLGDERLFGLAVLDITSGNFGVQEIKGWENLLAELERLNPVELLIPDD
WPQGLPAEKRPGARRRAPWDFDRDSARKSLCQQFATQDLKGFGCDKLTLAIGAAGCLLTY
AKETQRTSLPHLRSLRHERMDDTVILDGASRRNLELDINLAGGRDNTLQSVIDRCQTAMA
SRLLSRWLNRPLRDLKVLQARQDSIRCFLDGYRFEKLQPQLKEIGDIERILARIGLRNAR
PRDLARLRDALGALPELQNAMAELEAPHLARLAAITGTYPELASLLERAIIDNPPAVIRD
GGVLKTGYDSELDELLAISENAGQFLIDLETREKARTGLANLKVGYNRVHGYFIELPTKQ
AEQAPADYIRRQTLKGAERFITPELKTFEDKALSAKSRALAREKMLYDGLLETLISHLAP
LQDSAAALAELDVLSNLAERALNLDLNCPRFVDEPCMRIEQGRHLVVEQVLTTPFVANDL
GLDDRTRMLIITGPNMGGKSTYMRQTALIVLMAHIGSFVPAARCELSPVDRIFTRIGSSD
DLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAQLRAY
TLFATHYFELTVLPDSEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP
TPVIQRAREHLGRLETASLPHEPPMTRSTREPQVPHQSDLFASLPHPAIEKLGKLDLDDM
TPRQAIEMLYQLKNLL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctctccgcacacaccccgatgatgcagcaatactggaagctgaaaaaccag
catccagaccagctgatgttctaccgcatgggcgacttctacgaaatcttctacgaagat
gcgaaaaaagccgcgaaattgctggatatcaccctgaccgctcggggccagtcggcaggt
cagtcgattcccatgtgcgggattcccttccactcgctcgagggttatctggccaagttg
gtcaagctcggcgagtcggtggtgatctgcgagcagatcggtgacccggccaccagcaaa
gggccggtcgagcgtcaggtggtgcgtatcatcacgcctggcaccgtcagcgacgaggct
ttgctggacgagcgccgcgacaacctgatcgccgccgttctgggcgatgaacgcctgttc
gggctggcagtgctggacatcaccagcggcaacttcggcgttcaggaaatcaaaggctgg
gagaatttgctggccgagctggagcgtctgaatccggtcgagctgctgattcccgacgat
tggccgcaaggcctgccggcggagaagcgcccaggcgcgcggcgccgtgccccctgggac
ttcgatcgcgattcggcgcgcaaaagcctgtgccagcagttcgcgacccaggacctgaaa
ggcttcggctgcgacaaactgaccttggccatcggcgctgccggttgcctgctgacctac
gccaaggagacccagcgcaccagcctgccgcacttgcgcagcctgcgccatgagcgcatg
gacgacaccgtgatcctcgacggcgccagtcgccgtaacctggagctggacatcaacctg
gctggcggtcgcgacaacaccttgcagtcggtcatcgaccgctgtcagacggccatggcc
agtcgcctgctcagtcgctggctgaaccgtcctctgcgcgacctcaaggtgctacaggcg
cgccaggactcgattcgctgcttcctcgatggctaccgtttcgaaaagctgcaaccgcag
ctcaaggaaatcggtgacatcgagcgcatcctcgcgcggatcggcctgcgcaatgcgcgc
ccgcgcgacctggcgcgactgcgtgacgccctcggcgccctaccagaattgcagaacgcc
atggccgaactggaggcgccgcacctggcgcgtctggcggcgatcaccggcacctacccc
gagctggcgagcctgctcgaacgggcgatcatcgacaatccccccgcagtgatccgtgat
ggcggcgtactcaagaccggctatgacagcgagctcgacgaactgctggccatcagcgaa
aacgccgggcaattcctgatcgaccttgaaacccgcgagaaagcccgcaccggccttgcc
aacctgaaggtgggttacaaccgcgtacacggttacttcatcgagctgccaaccaagcag
gccgaacaggctccagccgactatatccgtcgccagacgctcaagggtgccgaacgcttc
atcacgcctgaactcaagaccttcgaggacaaagcgctgtcggccaagagtcgcgccctg
gcacgcgagaagatgctctacgacgggctgcttgaaaccctgatcagccaccttgctccg
ctgcaggacagcgcggccgcgttggccgagctggacgtgctgagcaacctcgccgagcgt
gcgctgaacctcgacttgaactgcccacgctttgtcgacgagccgtgcatgcgcatcgag
cagggtcgccacctggtggtcgagcaagtgctgaccacgcccttcgtggccaatgacctg
gggttggatgatcgcacccggatgctgatcatcaccggaccgaacatgggtggtaaatcc
acctacatgcgccagaccgcactcatcgtgctgatggcccacatcggtagctttgtccca
gccgcgcgctgcgagctgtcgccagtggaccgcatcttcacccgcatcggctcgagcgac
gacctcgccggcggtcgttcgaccttcatggtggagatgagcgaaaccgcgaacattctg
cataacgcgaccgagcgcagcctggtactgatggacgaggtgggccgcggtaccagcacc
ttcgatggcctctccctggcatgggctgccgccgagcgcttggcgcaattacgcgcctac
acgctgttcgcaacccattacttcgagctcaccgtattgccggacagtgagccgctggtg
gccaacgtgcacctcaatgccactgagcacaacgagcgcatcgtcttcctgcaccatgtc
ctgccaggtcctgccagccagagctacggcctggcagtggcgcagttggcaggcgtgccg
acgccggtcatccagcgcgcccgcgaacatctcggtcgcttggaaaccgcgagcctgccc
cacgaaccgccgatgactcggagcacgcgcgagccgcaggtaccgcaccagagcgatctg
ttcgccagcctcccgcaccccgccatcgagaagctgggcaagctggatctggacgacatg
acgccgcgtcaagctatcgaaatgctatatcaactgaaaaacctgttataa
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