Pseudomonas parafulva: NJ69_16805
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Entry
NJ69_16805 CDS
T03520
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03030
DNA replication
ppv03430
Mismatch repair
ppv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NJ69_16805
03430 Mismatch repair
NJ69_16805
03440 Homologous recombination
NJ69_16805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppv03032
]
NJ69_16805
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_16805
Enzymes [BR:
ppv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NJ69_16805
DNA replication proteins [BR:
ppv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NJ69_16805
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NJ69_16805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIZ34534
UniProt:
A0AAI8KF43
LinkDB
All DBs
Position
3842163..3842873
Genome browser
AA seq
236 aa
AA seq
DB search
MKLFPWLRPRTPTLDVDLQQRLASLPRPAALGVCSLREQRWVVLDLETSGLNLQRDQVLS
IGAVAIEDGAIALGGQFERTLRRPEQKTNASVLIHGLGPSALAAGSDPAQALVELLEFIG
DSPVLAFHAPFDQGMLGRALKDTLGYRLQQVFIDVAELAPMLNPDTVLREAGLDDWVARF
GLEVQARHHASADAQVTAELALILFSQARRQQLDSPLQLEQRLRQWRRRALQPHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgttcccctggctgcgcccgcgcacgccgacgctcgacgtcgatctgcaacag
cgcctggccagcctgccacgtccggccgcgctcggtgtgtgctcgctgcgcgagcagcgc
tgggtggtgctggacctggagaccagcggcctgaacctgcaacgcgaccaggtgctgtcg
atcggcgcggtggccatcgaggacggcgccatcgccctgggcgggcaattcgagcgcacc
ctgcgtcggccagagcagaagaccaacgccagcgtgctgatccacggtctgggccccagc
gccctggctgccggcagcgatcctgcccaggcgctggtcgagttgctggagttcatcggc
gacagcccggtgctggccttccatgccccattcgaccaaggcatgctcggccgggcactc
aaggacaccctcggttaccgcctgcaacaggtgttcatcgatgtcgccgaactggcgccc
atgctcaaccccgacacggtgctgcgcgaggcggggctggacgactgggtggcacgcttc
ggcctcgaggtgcaggcgcgtcaccacgccagcgccgacgcccaagtgaccgccgagctg
gcgctgatcctgttcagccaggcgcggcgccagcaactggatagccccctgcaactggag
cagcggctgcgccaatggcggcggcgcgcgctgcagcctcacggtctgtaa
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