Pseudomonas parafulva: NJ69_19575
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Entry
NJ69_19575 CDS
T03520
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NJ69_19575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppv03021
]
NJ69_19575
03400 DNA repair and recombination proteins [BR:
ppv03400
]
NJ69_19575
Enzymes [BR:
ppv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NJ69_19575
Transcription machinery [BR:
ppv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NJ69_19575
DNA repair and recombination proteins [BR:
ppv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NJ69_19575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Gp45_2
Motif
Other DBs
NCBI-ProteinID:
AIZ35050
UniProt:
A0ACH2SVK6
A0AAI8P9N8
LinkDB
All DBs
Position
complement(4463599..4463862)
Genome browser
AA seq
87 aa
AA seq
DB search
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPRVAWENDKPTVVALREIAEGIVT
NEFIAAEEIVTEDPVFAAFEDENNEAV
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtaactgttgaagactgcctggaacacgtggataaccgcttcgagctggtc
atgctctcgaccaagcgcgcccgccaactggccaccggcggcaaggaaccacgcgtggcg
tgggaaaacgacaagccgaccgtcgttgccctgcgcgaaatcgccgaaggcatcgtgacc
aatgaattcatcgccgctgaagagatcgtcaccgaggatccggtgttcgccgcgttcgag
gacgagaacaacgaggccgtctga
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