KEGG   Pseudomonas parafulva: NJ69_20340
Entry
NJ69_20340        CDS       T03520                                 
Name
(GenBank) type VI secretion protein ImpA
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ppv  Pseudomonas parafulva
Pathway
ppv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NJ69_20340
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppv02044]
    NJ69_20340
Secretion system [BR:ppv02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NJ69_20340
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C
Other DBs
NCBI-ProteinID: AIZ35183
LinkDB
Position
complement(4658637..4660574)
AA seq 645 aa
MLFTQKTRLAKVYSTLGPDVLILSELGGSEELGRLFEFELQLTSINIAIELNVLLGTPLC
VSVQTHGLVKRYFHGIVTRCSQSVSRGQFASYRVTLRPWLWMLTRTSDCRIFQKKTAPQI
IQQVFRDLGFSDFEDRLSRSYPEREYCVQYCETSFDFVSRLMEDEGIYYYFRHEKLRHVL
VLADAFIAHHKAPGYELVPFYPPDTQHRERDHINDWQLAREVQPGSLELTDYDFERPNAR
LEVRSVMPRPHLNGAYPLFDYPGGYSKTEDGEQYARTRMESLQSLHERIDMHGNARGLAC
GHLFALTSFWRLDQNREYLIVAARYHIVQESLETGGGSGAGQFESDLTCTDALQTFRSVS
STARPKVMGPQTALVVGPKDEEIWTDEHGRVKVHFYWDRHDKSDENSSCWIRVSQSWAGK
NWGAMQIPRIGQEVIVSFLGGDPDSPIITGRVYNGEQKVPYDLPANATQSGMKSRSSKDG
SSANFNEIRMEDKRGEEQLYMHAERNMDTVVKQDETLAVGANRTQTVGKLETYTVGQDRT
RGVRRDDKLVVGASKTDSVSTRYLIEVGENLRLVCGKSVIELNASGHINISCEHFSFHAS
KDGEINTDGTLDLNVGSGAQTSPDKQGVKKDIDDAVKALFPNSGK
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgttgttcacgcaaaagacacgtcttgctaaggtttacagcaccctaggccccgacgtg
ctgatcctctccgaactgggcggcagcgaggagctgggccgcctgttcgagttcgagctg
caactgaccagcatcaacatcgccatcgagcttaacgtgctgctcggcacgcctttgtgc
gtatcggtgcagacccatggcctggtcaagcgctacttccacggcatcgtgacccgctgc
agccagtcagtctcgcgcggtcagttcgccagctatcgggttacgctgcggccctggctg
tggatgctgacgcgcaccagcgattgccggattttccagaagaaaaccgcaccgcagatc
atccagcaagtgttccgggacctgggtttctcggatttcgaggatcgcctgagccgcagc
tatcccgagcgcgagtactgtgtgcagtattgcgagaccagcttcgatttcgtcagccga
ctgatggaagatgaaggcatctactactacttccgccacgaaaagttgcgccatgtactg
gtgctggccgacgcattcatcgcccaccacaaggcaccaggctacgaactggtacctttc
tatccgcccgacacacagcaccgcgagcgcgaccacatcaacgactggcagttggcgcgt
gaggtacaaccaggctcgctggaactcactgactacgatttcgaacgccccaacgcccgg
cttgaggtgcgctcggtgatgccgcgcccgcacttgaacggggcttatccgctgttcgac
tatcctggcggctacagcaagaccgaagacggcgagcaatacgcacgcacgcgcatggag
tcgctgcagagcctgcacgaacgcatcgacatgcacggcaatgcccgagggctggcctgc
ggccatctgtttgccctcaccagcttctggcggctggaccagaaccgtgagtacctgatc
gtcgcggcgcgctatcacattgtccaagagtcgctggaaaccggcggcggcagcggtgcc
ggccagttcgagagcgacctgacctgcaccgatgcgctgcagaccttccgatcggtttcc
agcaccgcccgacccaaggtcatgggcccgcagactgcgttggtggtcggcccgaaagac
gaggaaatctggaccgacgaacacggtcgggtcaaggtccacttctactgggatcgccat
gacaagtcggacgagaacagctcgtgctggattcgtgtttcgcaatcctgggccggcaag
aactggggcgcgatgcagattccgaggatcggccaggaagtcatcgtcagcttccttgga
ggcgaccctgattcgccgatcatcaccggccgggtatacaacggcgagcagaaagtgccc
tacgacctgcccgccaatgccacccagagtggcatgaagagccgttcgagcaaggacggc
agctcggcgaatttcaatgaaatccgcatggaagacaagcgcggagaggaacagctgtac
atgcacgccgagcgcaacatggacactgtcgtgaagcaggacgagacattggcggtgggg
gcaaatcggacacagacggtgggcaagctggaaacctacaccgtcggccaggaccggacc
cggggcgtgcgccgtgacgacaaactggtggtgggggccagtaaaacagacagcgtcagt
acccgctacctgatcgaggtgggcgaaaacctgcgccttgtgtgtggcaagagcgtgatc
gagctcaacgccagcggccatatcaacatcagctgcgagcatttcagtttccacgccagt
aaggacggggaaatcaacacagatggcaccctggacctcaatgtcggaagcggcgcccag
acctcaccggacaagcaaggtgtaaagaaggacatcgacgacgcggtcaaagccctcttt
ccgaactcaggcaagtaa

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