Pseudomonas parafulva: NJ69_20400
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Entry
NJ69_20400 CDS
T03520
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
ppv
Pseudomonas parafulva
Pathway
ppv02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NJ69_20400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppv02044
]
NJ69_20400
Secretion system [BR:
ppv02044
]
Type VI secretion system
Imp/Vas secretion system core components
NJ69_20400
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GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AIZ35193
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Position
4673337..4674671
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFITTQHFQQHDRYLETFIDARSRPLSTAAWGFSELLIDQGLLAQGKL
AIISARGLLPDGTPFDIPRDDLPPPPLEIPEDLRDAVIYLGLPLKRAGARDTVDEGEPLD
GARYVARVSEVRDDNAPFENRAPLALGSRALRLLSEREGLGDYAALGVLRIREKRADRAL
MLDDSYIPPVLDVAVSATLANFRSELLGLLHQRGEALAGRVVASANGGASEIADFMLLQL
VNRAQPLVEHLGQLSPLHPERLFSELVALAGEFATFTQDGRRPESFPAYQHDDLAATFQP
LMASLRQALSMLIDSKAVAIPIVEKAYGVHVGMLADRSLLDSASFILVVRADVPSETLRS
RFGQQSKIGSVEHIRDLVNLQLPGIGLLPLPVAPRQIPFHAGSTYFELDRGSEHWKQLQH
SGGFAFYVAGEFPGLSLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgcgtggtctggtcggaaggcatgttcatcacgacccagcacttc
cagcagcacgaccgctacctggagacgttcatcgatgcccgcagtcgcccgctgtccacg
gccgcctggggtttctccgagttgctgatcgaccagggcctgctggcccagggcaagctg
gcgatcatcagcgcccgaggcctgttgccggacggtacgccgttcgacatcccgcgtgac
gacctgccaccgccgccgttggaaattcccgaagacctgcgcgatgcggtgatctatctg
ggcctgccgctcaagcgcgccggcgcccgcgacaccgtcgatgaaggtgaaccgctggac
ggcgcgcgttacgtcgcccgggtcagcgaagtgcgcgacgacaatgcgccgttcgagaac
cgcgcgccgttggccctgggcagtcgcgccctgcgcctgttgtccgagcgcgagggcttg
ggcgactacgcggcgctgggcgtgctgcgtatccgtgagaagcgcgccgaccgcgcgctg
atgctcgatgacagctacatcccgcccgtgctggacgtggcggtgagcgctacgttggcg
aatttccgcagcgaactgctgggtctgctgcatcaacgcggcgaagcgctggccgggcgc
gtggtggcttcggccaacggcggcgcctcggaaatcgccgacttcatgctgctgcaactg
gtcaaccgggcgcagccgctggtcgagcacctgggccagctcagcccgctgcacccggag
cggctgttcagcgaactggtcgcccttgccggcgagttcgccaccttcacccaggacggc
cggcgtccggagagcttcccggcgtatcagcacgatgatctggcggcgacgttccagccg
ctgatggcttccctgcgccaagccctgtcgatgctgatcgacagcaaggcggtggccatt
ccgatcgtcgagaaagcctatggcgtgcacgtgggcatgctggccgaccgcagcctgctg
gacagcgccagcttcatcctggtggtgcgcgccgatgtgccgagcgaaaccctgcgcagt
cggttcggccagcagagcaagatcggctcggtggaacacatccgcgacctggtcaacctg
caattgcctggcatcggcctgttgccgttgccggtggcgcccaggcagatcccgttccat
gccggttccacttactttgagctcgaccgtggcagcgagcactggaaacagttgcagcat
tccggtggcttcgccttctacgtcgctggcgagttccctgggttgagcctggcgttctgg
gccattcgaggataa
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