Pseudomonas parafulva: NJ69_21270
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Entry
NJ69_21270 CDS
T03520
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv00730
Thiamine metabolism
ppv01100
Metabolic pathways
ppv01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NJ69_21270
Enzymes [BR:
ppv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
NJ69_21270
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIZ35346
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Position
4888621..4890501
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AA seq
626 aa
AA seq
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MSQQEKTISLSESARVDQQSVQPLPNSRKVYVQGSRPDIRVPMREISLHDTPTDFGGEQN
APVLVYDTSGPYTDPDVIIDVRKGLGDVRSAWIDARGDTERLDGLSSNFGQQRLNDAELT
KLRFAHVRNPRRAKAGANVTQMHYARQGIVTAEMEYVAIRENMKLQEARAAGLLDQQHGG
HSFGASIPKEITAEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALGS
SIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGVA
ENLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHH
QENFLYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKIAWKHD
VQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGW
FGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEF
RWEDQFNLGLDPDTARAFHDETLPKESAKVAHFCSMCGPKFCSMKITQEVREYAAKIDTV
DVTAEQGMREQAQRFRQEGSQLYRKV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaagaaaaaacgatcagcctgagcgagtcggcccgcgtcgaccagcagtcc
gtgcaaccgctgcccaattcgcgcaaggtctacgtccagggctcgcgcccggacatccgc
gtgcccatgcgcgagatcagcctgcacgacacccccaccgacttcggcggcgagcagaac
gccccggtactggtctacgatacctccggcccctacaccgaccctgacgtcatcatcgac
gtgcgcaaaggcctgggcgatgtgcgctcggcgtggatcgacgcgcgtggcgacaccgag
cgcctggacggcctgagttcgaacttcggccagcaacggctcaacgatgcggagctgacc
aagctgcgcttcgcccacgtgcgcaacccgcgccgggccaaggccggcgccaacgtcacg
cagatgcactacgcgcgtcagggcatcgtgaccgccgaaatggaatacgtggcgatccgc
gagaacatgaagttgcaggaggcccgcgccgccggcctgctcgaccagcagcatggcggt
cacagcttcggcgccagcatccccaaggaaatcaccgctgaattcgtccgcgaggaaatc
gcccgtgggcgcgcgatcatcccggccaacatcaaccacaccgagctggagccgatgatc
atcggccgcaacttcctggtgaagatcaacggcaacatcggcaacagtgccctgggctcg
tccatcgaagaggaagtggccaaactgacctggggcattcgctgggggtcggacacggtg
atggacctgtccaccggcaagcacatccacgagacccgcgagtggatcatccgcaactcg
ccggtgccgatcggcaccgtgccgatctaccaggccctggagaaggtcggtggcgttgcc
gaaaacctcacctgggagctgttccgcgacaccctgatcgagcaggccgagcagggtgtg
gactacttcaccatccacgctggcgtactgctgcgctacgtgccgctgaccgccaagcgc
gtcaccggcatcgtcagtcgtggcggctcgatcatggccaagtggtgcctggcgcatcac
caggagaacttcctgtacacgcacttcgacgagatctgcgaaatcatgaaggcctacgac
gtcagcttctcgctcggcgacggcttgcgtcccggctcgatcgccgacgccaacgacgcc
gcccagttcggtgagctggaaaccctgggcgagttgaccaagatcgcctggaaacacgat
gtgcaatgcatgatcgaaggccccggccatgtgccgatgcagttgatcaaggagaacatg
gacaagcagttggagtgctgcgacgaggcgccgttctacacccttggcccgctgaccacc
gacatcgcccccggctacgaccacatcacctcgggtatcggcgcggcgatgatcggctgg
ttcggctgcgcgatgctctgctacgtcacgcccaaggaacatctgggcctgccgaacaag
gacgacgtcaagaccggcatcatcacctacaagatcgccgcccacgccgccgacctcgcc
aaaggtcatcccggcgcgcagatccgcgacaacgcgctgtccaaggcgcgtttcgagttc
cgctgggaggatcagttcaacctgggcctggacccggacacggcgcgcgccttccacgac
gagaccctgcccaaggagtcggccaaggtcgcgcacttctgctcgatgtgcgggccgaag
ttctgctcgatgaagatcacccaggaagtgcgcgaatacgccgccaagatcgacaccgtc
gatgtcacggccgagcaaggcatgcgcgagcaggctcagcgcttccgtcaggaaggcagc
cagttgtaccgcaaggtgtga
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