Pseudomonas parafulva: NJ69_21365
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Entry
NJ69_21365 CDS
T03520
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppv
Pseudomonas parafulva
Pathway
ppv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NJ69_21365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppv03019
]
NJ69_21365
03009 Ribosome biogenesis [BR:
ppv03009
]
NJ69_21365
Messenger RNA biogenesis [BR:
ppv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NJ69_21365
Ribosome biogenesis [BR:
ppv03009
]
Eukaryotic type
Pre-60S particles
RNases
NJ69_21365
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIZ35365
UniProt:
A0AAI8P9Z8
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All DBs
Position
4910393..4910935
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AA seq
180 aa
AA seq
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MHNPQNLIWIDLEMTGLDPDTDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESRIDMAQAQAQTLAFLEQWVPKGKSPICGNSICQDRRFLYRHMP
ELESYFHYRNLDVSTLKELAARWAPHVRDSFQKGGTHLALDDIRESIAELRHYRQHFIKV
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacccacagaacctgatctggatcgatctggagatgaccggcctggacccggac
accgatgtcatcatcgaaatggccaccattgtcaccgacagcgagctgaacaccttggcc
gaaggcccggtgatcgccatccaccacagcgatgaggtgctggcgcgcatggacgagtgg
aacacccgcacccacggcgcctcgggcctgacccagcgcgtgcgcgagagccgcatcgac
atggcccaagcccaggcgcagaccctggcgttcctcgagcagtgggtgcccaagggcaag
tcgccgatctgcggcaacagcatctgccaggaccggcgcttcctctatcgccacatgcct
gagctcgaaagctacttccactaccgcaacctggatgtctccacgctcaaggagctggct
gcgcgttgggcgccgcacgtgcgcgacagcttccagaagggcggaacgcacctggccctg
gacgacatccgcgagtcgatcgccgagttgcgccactaccgccaacatttcatcaaggtc
tga
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