Pseudomonas putida W619: PputW619_0003
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Entry
PputW619_0003 CDS
T00675
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
ppw
Pseudomonas putida W619
Pathway
ppw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PputW619_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_0003
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PputW619_0003
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_16
AAA_15
AAA_13
AAA_29
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ACA70509
UniProt:
B1J3Y4
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All DBs
Position
3081..4184
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AA seq
367 aa
AA seq
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MSLRRIMVTAVRNLHPVTLSPSPRINILYGANGSGKTSVLEAVHLLGLARSFRSTRLNPV
IQYEQAACTVFGEVQLSEGGTSNLGVSRERAGDFTIRIDGQNAKSAAQLAELLPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEPRFMPAWQRLQKALRQRNSWLRHGTLDPASQAAWD
RELCLASAEIDEYRRNYIKALKPVFEQTLSELVELDGLTLSYYRGWDKDRELNEVLASSL
LRDQQMGHTQAGPQRADLRLRLAANNAADILSRGQQKLVVCALRIAQGHLVSQARRGHCI
YLVDDLPSELDDQHRRALCRLLEELRCQVFITCVDHELLREGWQTETPVALFHVEQGRIT
QTHDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcgacgtatcatggtcaccgcggtgcgcaacctgcacccggtgaccctctcg
ccctccccccgcatcaatatcctctacggcgccaacggcagcggcaagaccagtgtgctg
gaagccgtgcatttgctcgggttggccagatcgtttcgcagtacccgtctgaatccggtc
attcaatacgagcaggcagcgtgcacggtttttggcgaagtacagttgagcgagggtggc
accagcaacttgggtgtgtcgcgtgagcgggcgggcgacttcactatccgtatcgatggg
cagaatgccaagagcgccgcgcagcttgcagaactgctgcccctgcagctcatcaaccca
gacagtttcaggttgcttgaaggcgcaccgaagatccgtcgccagtttctggattgggga
gtgttccacgtggaacctcgcttcatgccagcttggcagcgtctgcagaaggcgttgcgg
cagcggaactcatggttgcggcatggtacacttgacccagcttcgcaagccgcctgggac
cgggaattgtgcctggccagcgcggaaatagatgaataccgtcgcaactacatcaaggcc
ttgaagcccgtcttcgagcaaaccctgagcgaactggtcgagctggacgggttgaccctt
agctactaccgaggctgggacaaggaccgggaactcaacgaagtactcgcctcctctctc
cttcgcgatcagcagatgggccatacccaggccggtccgcagcgtgctgatctgcgtctt
cgtttggctgccaataacgcagccgacatcctgtcgcgtggtcagcaaaagctggtggtc
tgtgctctgcgcattgcccaaggccatctcgttagccaggctcgccgcggccactgtatt
tatctcgtggatgacttgccgtccgagttggacgaccagcatcgccgtgcactgtgccgc
ttgctagaagaattacgctgccaggtgttcatcacctgtgtagatcacgaattactgagg
gaaggctggcagacggaaacgccagttgctttgttccacgtggaacaaggccgtatcacc
cagacccacgaccatcgggagtga
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