Pseudomonas putida W619: PputW619_0172
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Entry
PputW619_0172 CDS
T00675
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PputW619_0172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppw03021
]
PputW619_0172
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_0172
Enzymes [BR:
ppw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PputW619_0172
Transcription machinery [BR:
ppw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PputW619_0172
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PputW619_0172
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Gp45_2
Motif
Other DBs
NCBI-ProteinID:
ACA70678
UniProt:
B1J4N3
LinkDB
All DBs
Position
complement(177320..177583)
Genome browser
AA seq
87 aa
AA seq
DB search
MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPRVAWENDKPTVVALREIAEGIVT
NEFIAAEEIVTEDPVFAAFEDESNEAV
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtaactgttgaagactgcctggaacacgtggataaccgttttgagctggtc
atgctctcgaccaagcgcgcccgtcagctggctaccggcggcaaagagccacgcgtagcg
tgggaaaacgacaagccaaccgtcgttgccctgcgtgaaatcgcagaaggcatcgtcacc
aacgaattcattgccgctgaagagatcgtcaccgaggatccggtcttcgccgcgttcgag
gacgagtccaacgaggctgtctga
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