Pseudomonas putida W619: PputW619_0180
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Entry
PputW619_0180 CDS
T00675
Name
(GenBank) exodeoxyribonuclease III Xth
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PputW619_0180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_0180
Enzymes [BR:
ppw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PputW619_0180
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PputW619_0180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
ACA70686
UniProt:
B1J4L5
LinkDB
All DBs
Position
complement(185254..186033)
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLLLPSGMNGDDDLN
QKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLPPERAWMDA
ITGDMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtaaatggcattcaggctgcagccgagcgtggattgctc
agctggttgcaagcccagaatgccgacgtcatctgccttcaggatacccgcgcctcggcc
tttgaactcgacgacccagctttccagctcgatggctatttcctttatgcctgcgacgcg
gaggtacccgcccaaggtggcgtggcactgtactcgcgcatgcagcccaaggcagtcatc
accggcctgggcttcgagacagccgaccgctacgggcgttatctgcaagcagatttcgac
aaagtcagtattgccagcctgctcttgccttcgggcatgaacggcgacgacgacttgaac
cagaagttcaagttgatggacgacttcgccaagtacctggacaagcagcggcgcaagcgt
cgtgagtacatctattgcggctcgttctacgtggcgcagcagaagctcgacatcaagaac
tggcgtgacagccagcagtcgccaggcttcctgccgcctgagcgtgcctggatggatgcg
atcactggcgacatgggctacgtggatgccctgcgcgaagtcagccgtgaaggtgaccag
tacagctggtggccggacaacgagcaggccgagatgctcaacctgggctaccggttcgac
taccagatcctcaccccgggcctgcgccgcttcgtgcgcaatgcccgcctgccgcgtcag
ccgcgcttctcgcagcatgcgccgctgatcgtcgactatgactggacgttgaccatctga
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