KEGG   Pseudomonas putida W619: PputW619_0245
Entry
PputW619_0245     CDS       T00675                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
ppw  Pseudomonas putida W619
Pathway
ppw00300  Lysine biosynthesis
ppw00470  D-Amino acid metabolism
ppw01100  Metabolic pathways
ppw01110  Biosynthesis of secondary metabolites
ppw01120  Microbial metabolism in diverse environments
ppw01230  Biosynthesis of amino acids
Module
ppw_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ppw00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PputW619_0245
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PputW619_0245
Enzymes [BR:ppw01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PputW619_0245
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ACA70751
UniProt: B1J1W1
LinkDB
Position
complement(258748..259995)
AA seq 415 aa
MNAFNYRDGGLFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYTDALQGVEHLVCFAVK
ANSNLGVLNVLARMGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLDLVDRLADCGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGDRDLALVFEPGRYIVANAGALLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVTPREGEGRAYDLVGPICETGDFLAKDRQLNLAEGD
LLAVQSAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgaacgctttcaattaccgcgacggtggactgttcgcggagggcgtggccctgtcggcc
atcgccgaacgtttcggcacccccacctacgtgtactcgcgcgcccacatcgaggcccag
taccgcagctataccgatgccctgcaaggtgtcgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggtgtgctgaacgttctggcccgcatgggcgcaggcttcgacatc
gtttccggcggtgagctggagcgggtactggccgccggtgggcgggctgaccgtgtggtg
ttctccggcgtcggcaagacccgcgaagacatgcggcgcgcgttggaagtcggcgttcat
tgcttcaacgtcgaatccaccgacgaactggagcgcctgcaggtggttgccgccgagatg
ggcaaggttgccccggtctcgctgcgggtcaacccggacgtcgatgccggcacccaccct
tacatttccaccggcctcaaagagaataagttcggcatcgccatcgccgacgccgaagcc
atctacgtgcgtgccgcgcagctgccaaacctggaagtggtcggtgtcgactgccacatc
ggctcgcagctgaccaccgtagagccattcctcgacgcgctcgaccgcctgctggacctg
gtcgaccgcttggccgattgcggcatccacctgcgccatctggacctgggcggcggtgtt
ggcgtgcgctatcgcgacgaagagccgccactggtagccgattacatcaaggccatccgc
gagcgcgtcggcgaccgtgacctggccctggtgttcgagccgggccgctacatcgtggcc
aacgccggtgccctgctgacccgcgtggaatacctcaagcacaccgaacacaaagacttc
gccatcattgatgcggcgatgaacgacctgatccgtccagccctgtaccaggcctggatg
ggcgttagcgcggtcaccccacgtgagggcgaagggcgtgcctacgacctggtcgggcca
atctgcgaaaccggcgacttcctcgccaaggaccgccagctgaacctggccgaaggtgac
ctgctggctgtgcagtctgcgggcgcctatggtttcgtcatgagctcgaactacaacacc
cgtggccgttgtgcggaaatcctggtcgacggcgatcaggctttcgaagtccgccgtcgc
gagaccattgccgaactgtacgctggcgaaagcctgctgccggagtga

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