Pseudomonas putida W619: PputW619_0245
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Entry
PputW619_0245 CDS
T00675
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw00300
Lysine biosynthesis
ppw00470
D-Amino acid metabolism
ppw01100
Metabolic pathways
ppw01110
Biosynthesis of secondary metabolites
ppw01120
Microbial metabolism in diverse environments
ppw01230
Biosynthesis of amino acids
Module
ppw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PputW619_0245
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PputW619_0245
Enzymes [BR:
ppw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PputW619_0245
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACA70751
UniProt:
B1J1W1
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All DBs
Position
complement(258748..259995)
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AA seq
415 aa
AA seq
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MNAFNYRDGGLFAEGVALSAIAERFGTPTYVYSRAHIEAQYRSYTDALQGVEHLVCFAVK
ANSNLGVLNVLARMGAGFDIVSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVH
CFNVESTDELERLQVVAAEMGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAEA
IYVRAAQLPNLEVVGVDCHIGSQLTTVEPFLDALDRLLDLVDRLADCGIHLRHLDLGGGV
GVRYRDEEPPLVADYIKAIRERVGDRDLALVFEPGRYIVANAGALLTRVEYLKHTEHKDF
AIIDAAMNDLIRPALYQAWMGVSAVTPREGEGRAYDLVGPICETGDFLAKDRQLNLAEGD
LLAVQSAGAYGFVMSSNYNTRGRCAEILVDGDQAFEVRRRETIAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttcaattaccgcgacggtggactgttcgcggagggcgtggccctgtcggcc
atcgccgaacgtttcggcacccccacctacgtgtactcgcgcgcccacatcgaggcccag
taccgcagctataccgatgccctgcaaggtgtcgagcacctggtgtgcttcgcggtcaag
gccaactccaaccttggtgtgctgaacgttctggcccgcatgggcgcaggcttcgacatc
gtttccggcggtgagctggagcgggtactggccgccggtgggcgggctgaccgtgtggtg
ttctccggcgtcggcaagacccgcgaagacatgcggcgcgcgttggaagtcggcgttcat
tgcttcaacgtcgaatccaccgacgaactggagcgcctgcaggtggttgccgccgagatg
ggcaaggttgccccggtctcgctgcgggtcaacccggacgtcgatgccggcacccaccct
tacatttccaccggcctcaaagagaataagttcggcatcgccatcgccgacgccgaagcc
atctacgtgcgtgccgcgcagctgccaaacctggaagtggtcggtgtcgactgccacatc
ggctcgcagctgaccaccgtagagccattcctcgacgcgctcgaccgcctgctggacctg
gtcgaccgcttggccgattgcggcatccacctgcgccatctggacctgggcggcggtgtt
ggcgtgcgctatcgcgacgaagagccgccactggtagccgattacatcaaggccatccgc
gagcgcgtcggcgaccgtgacctggccctggtgttcgagccgggccgctacatcgtggcc
aacgccggtgccctgctgacccgcgtggaatacctcaagcacaccgaacacaaagacttc
gccatcattgatgcggcgatgaacgacctgatccgtccagccctgtaccaggcctggatg
ggcgttagcgcggtcaccccacgtgagggcgaagggcgtgcctacgacctggtcgggcca
atctgcgaaaccggcgacttcctcgccaaggaccgccagctgaacctggccgaaggtgac
ctgctggctgtgcagtctgcgggcgcctatggtttcgtcatgagctcgaactacaacacc
cgtggccgttgtgcggaaatcctggtcgacggcgatcaggctttcgaagtccgccgtcgc
gagaccattgccgaactgtacgctggcgaaagcctgctgccggagtga
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