Pseudomonas putida W619: PputW619_0760
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Entry
PputW619_0760 CDS
T00675
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PputW619_0760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_0760
Enzymes [BR:
ppw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PputW619_0760
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PputW619_0760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACA71265
UniProt:
B1J2E1
LinkDB
All DBs
Position
844995..848471
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AA seq
1158 aa
AA seq
DB search
MANPTSLHPGFMIVHGNRLDDLRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DPLADDQGGCGIAAAIEVQLPGSFMWQLYRKVLGRDEIPEVSLLDKAPLTWRLMRLLPAL
IERPHFEPLRRFLTDDGDLRKRYQLAERLADLFDQYQVYRADWLKDWAAGQHVLNTARGE
RKPLAPGNRWQAELWRALLEDVGEQGMAQSRAGVHQRFTECINNLEQPPAGLPSRVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWSDIVADKDLLRHQYKRQQRKQGMPVQL
DDESLHQHAHPLLAAWGKQGRDYINLLDSYDDPGSYQGAFSDGRIDLFSETEPATLLNQL
QDDILELRPLTETRELWPEVDLAKDRSVRFHIAHSPQREVEILHDQLLARFSADPTLRPR
DVIVMLPAIDNYAPHIRAVFGQLQRNDPRYIPFTLTDQGQRGRDPLLIALEHLLKLPDSR
FAVSEVLDLLDVPAVRGRFGIRESDLPTLHRWIEGAGIRWGLNAEQRATLGLPEGLEQNS
WRFGLRRMLLGYAVGMGEGCDGIEPYDEIGGLDAALIGPLVALLDALDVANHVLSQPATA
AQWGERLNALLQVFFLAEGEHDEFLLMQLQELRDSWLEVCETVGLQDLLPLTVIREAWLS
GLDQGKLSQRFLAGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRAQQPLDFDLMASDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLAAGWRLAG
SGDSQQAGEQLLHALTQEHPLQPFSPRYFQKGSALFSYAHEWQLLHQVGDEAKQSDVGLP
PYSSNEALTLMQLQDFLRHPVRHFFSQRLKVFFEALESPTPDEEPFVLDALQRYSASESL
LGAALAEPENAEQALQAQARRLQACGMLPLAGFGELLQAELIQPLPDLLQRHRHLLQRWP
ALVEGALPIHFEHGGHRLEGWLGRVYQADDQSLLSITTVPNTISAGRNSLKWHRLIASWV
MHLAACAEGYPLHSALLASDITLLLAPLPQHEAAEQLGHLLVSRQAAMNAPLPVAAKTAF
AWLAQDDPDKALAAAARAYEGDGRTSFGERSESPALARQFRDFAALSADETFEGWCETLY
RPLFSAAWQTLGNPESGA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggccaatccgacttcactccatcccggcttcatgatcgtgcatggcaaccgcctggac
gacttgcgcagcctggtggtgagctggatgcggcgctatccgctggcccccctggaaaac
gaaatcgccctggtacaaagcaacggcatcgcccagtggctcaagctggctttggccgag
gacccgctcgcagatgaccagggcggttgtgggatcgctgctgccatcgaagtgcagttg
ccgggcagcttcatgtggcagctgtacagaaaagtcctcgggcgtgacgagattccagag
gtttctctgctcgacaaggccccgctgacctggcgactcatgcgtttgctgccagcgctg
atcgaacgcccgcatttcgaaccgttgcggcgctttctcactgacgacggtgatctgcgc
aaacgctatcagctggcagagcgcttggctgacctgttcgaccagtatcaggtctatcgc
gccgactggctgaaggactgggctgccgggcagcacgttctcaatacggcccgtggcgaa
cgcaagcccctggctcctggcaaccgctggcaggccgagctgtggcgggccttgctcgag
gatgtaggtgaacaaggcatggcccagagccgtgcaggagtgcaccagcgattcaccgaa
tgtatcaacaaccttgagcaaccccctgcgggtctgccttcacgggtaatcgtattcggt
atctcatctctgcctgcccaagcgttggaagcactggcaggccttgcgcggttcagccag
gtattgttgtgtgtgcacaacccttgccgacatcactggtcggacatcgttgccgacaag
gacctgctacgccaccagtacaagcgccaacagcgtaagcagggcatgcccgtgcaactg
gatgacgagtccttgcatcagcacgcccaccccttgctggccgcctggggcaagcagggc
cgcgactacatcaacctgctcgacagttatgacgacccaggcagctaccaaggtgcattc
agcgatgggcgcatcgacctgttcagcgaaaccgagcccgcaacactgctcaatcagctg
caggacgatatcctcgagctgcgcccgcttaccgaaacccgtgagctgtggcctgaggtc
gatctggcaaaagaccgctccgttcgcttccacatcgcccacagtccacagcgcgaagtt
gagatcctgcacgaccagttgttggcccgcttcagcgccgaccccaccctgcgcccgcgc
gacgtcatcgtcatgctcccggcaatcgacaactatgcaccgcatatccgtgccgttttc
ggccagttacagcgcaacgacccgcgttacatacctttcaccctgaccgatcagggccag
cgcgggcgtgatccattgttgattgcccttgagcatctgctcaagctgccagacagtcgt
ttcgccgtcagcgaagtgctcgatctcctggacgtaccggctgtgcgaggacgtttcggg
attcgcgaaagcgacctgcccacgctgcaccgctggatcgaaggtgccggtatacgttgg
gggctgaatgccgagcagcgagcgaccctgggcctgcccgaaggcctggagcagaacagc
tggaggttcggcctaaggcgtatgttgttgggttatgccgtcggtatgggtgaaggctgt
gacggtatcgaaccctacgacgaaatcggcggcctggatgctgcgctgatcggcccgttg
gtggccttgctcgacgctctcgatgtggccaaccatgtcctctctcagccagccactgct
gcccagtggggcgagcgactgaacgcgctgttgcaggtgtttttcctcgcagaaggcgag
catgacgaattcctgctcatgcaactgcaggagctgcgcgatagctggctggaggtgtgc
gagaccgtaggcttacaggacttgctgcccctcacggtcatacgcgaggcgtggttgtcg
ggcctggatcagggcaagctgtcccagcgttttcttgcaggttcagtaaacttctgcacc
ctcatgccgatgcgtgccatcccgttccgggtggtctgcctgctgggcatgaatgacggc
gattacccgcgcgcccagcagccgctggacttcgacctgatggccagtgactaccgcccc
ggcgatcgctcgcgccgggaggatgaccgttacctgctgctcgaagcgttgttgtccgcg
cgcgatcagctgtacatcagctgggtcggccggagcatccgcgataatagcgagcgcccg
gcatccgtactcataggccaactgcgcgatcacctggctgcaggttggcgactggccggt
agcggcgacagccagcaagcgggcgagcagttgttgcatgcgttgactcaagagcatcca
ctgcagcccttcagcccgcgctatttccagaaaggcagcgcgttgttcagttatgcccat
gaatggcagttgctgcatcaggtcggcgatgaggctaaacagtcggacgttggcctgccg
ccttacagtagtaatgaagcccttaccctcatgcaactgcaggattttctgcgtcatccg
gtgcgacacttcttcagccagcgcctgaaagtgttcttcgaggcgctggagtcgccgacg
ccggatgaggagccgttcgtcctcgatgccttgcagcgctatagcgccagtgaaagcctg
ctcggcgcggcgctggccgaaccggaaaacgccgagcaggcgctgcaagcccaggcgcgc
cggctgcaggcatgcgggatgctgcccttggccgggttcggcgagcttttgcaggcagag
ctgattcagccgctgcccgacctgctgcaacgccatcgccacttgctgcagcgctggccc
gctttggtcgagggcgcactgccgatccatttcgagcatggcggccatcgcctggagggt
tggcttggccgggtgtatcaggccgacgaccaaagcctgttgagcatcaccacggtgccc
aacaccatcagcgccgggcgtaacagcctcaagtggcaccggttgatcgccagctgggtc
atgcacctggcggcgtgcgccgaaggctatccgctgcatagcgccctgttggccagcgac
atcactctgctgctcgcgccactgccacaacacgaagctgccgagcagctcggccatctg
ctggtgtcacgccaggccgcaatgaatgcgccgctgccggttgccgccaagacagcgttc
gcctggctggcccaggacgatcctgacaaagccctcgccgcagcggcccgtgcttacgaa
ggtgatggccgcaccagtttcggtgagcgcagcgaaagcccggccctggcccgacagttc
cgtgacttcgccgcactcagtgccgacgaaacctttgaaggctggtgcgaaaccctgtac
cgcccgttattcagcgcagcctggcagacgctgggcaacccggagagtggcgcatga
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integrated database retrieval system
