Pseudomonas putida W619: PputW619_0794
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Entry
PputW619_0794 CDS
T00675
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppw
Pseudomonas putida W619
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_0794
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PputW619_0794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA
AAA_22
GvpD_P-loop
SLFN-g3_helicase
Rad51
RecA
AAA_24
nSTAND3
DUF7125
NTPase_1
AAA_14
MCM
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ACA71299
UniProt:
B1J2U6
LinkDB
All DBs
Position
884965..886398
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AA seq
477 aa
AA seq
DB search
MPTRSRHACVGYHGDFFQETLPMAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMI
ESGGAAAPSGRAGWTGQQAQIKTLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGG
DPGIGKSTILLQTLCNIAVGMPALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIETI
IATARQEKPRVMVIDSIQTIFTEQLQSAPGGVAQVRESAALLVRYAKQSGTAIFLVGHVT
KEGSLAGPRVLEHMVDTVLYFEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSN
PSAIFLNRAQEEVPGSVVMATWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLL
AVLHRHGGIPTHDQDVFLNVVGGVKVLETASDLALLAAVMSSLRNRPLAHGLLVFGEIGL
SGEVRPVPSGQERLKEAAKHGFKRAIVPKGNAPKESPAGLQVIAVTRLEQALDALFE
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcgctcgagacacgcctgcgtcggctatcatggcgattttttccaggagacc
ctgcccatggccaaggccaagcgcttgtatggctgcactgagtgtggcgcgacctttccc
aaatgggccggccagtgtggcgaatgcggtgcctggaacaccctggtcgaaaccatgatc
gagagcggcggcgcagcggcacccagcggtcgcgccggctggaccgggcaacaggcgcag
atcaagaccctggccgaagtcagcgtcgaggaaattccgcggttcaccaccagcagcacc
gaactcgatcgcgtgctgggcggcggcctggtcgacggctcggtggtgttgatcggtggt
gatccgggcatcggcaaatcgaccattctgctgcagaccttgtgcaacattgctgtgggc
atgccggcgctgtatgtcaccggcgaggagtcgcagcagcaggtggccatgcgttcacgc
cgcctggggctgccccaggaccagctcaaagtgatgaccgagacctgtattgaaacgatc
atcgctacggcgcgtcaggaaaagccccgggtcatggtcatcgattcgatccagacgatc
ttcaccgagcaattgcaatcagcgcctggcggtgttgctcaggtgcgcgaaagtgcggca
ttgctggtgcgctacgccaagcagagcggcacggcgatcttccttgtcggccatgtcacc
aaggaaggctcgctggcgggcccgcgggtgctggaacacatggtcgacaccgtgttgtat
ttcgagggtgagtccgatggccgcttgcgcttgttgcgcgcggtgaagaaccgctttggt
gcggtcaatgaattgggtgtcttcggtatgaccgaccgtgggctcaaagaggtttccaac
ccttcggcgatcttcctcaaccgggctcaggaagaagtaccgggcagcgtggtcatggcc
acgtgggaaggtacccggccgatgctggtagaggtacaagcgctggtcgatgacagccac
ctggccaacccgcgacgtgtcaccctgggcctggaccagaaccgtttggccatgttgctg
gcggtgctgcaccgccatggtggtattcccacccatgaccaggacgtgtttctcaatgtc
gtcggtggggtgaaggtccttgaaaccgcgtcggatctggccttgttggctgcggtgatg
tccagcctgcgcaaccggccgttggcccatgggctgctggtatttggcgagattggtttg
tcgggcgaggtacggccggttcccagtgggcaggagcgcctgaaagaagcggcgaaacat
ggcttcaagcgggccatcgtgcccaagggcaacgcaccgaaggaatcaccggcggggctg
caggtgatcgcagtaacccggctggagcaagctctggacgccttgttcgaataa
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