Pseudomonas putida W619: PputW619_1054
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Entry
PputW619_1054 CDS
T00675
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PputW619_1054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_1054
Enzymes [BR:
ppw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PputW619_1054
DNA repair and recombination proteins [BR:
ppw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PputW619_1054
Prokaryotic type
PputW619_1054
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACA71559
UniProt:
B1J4J3
LinkDB
All DBs
Position
1159719..1160411
Genome browser
AA seq
230 aa
AA seq
DB search
MTDDDRIKLEPGWKNALRAEFDQPYMHQLREFLRQEYAAGKEIYPPGPMIFNALNSTPLE
QVKVVILGQDPYHGPGQAHGLCFSVQPGVPTPPSLVNIYKELHRDLNIPIASHGYLQSWA
EQGVLLLNTTMTVERANAASHAKKGWEFFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLI
DGTKHLVLKSVHPSPLSAYRGFLGCGHFSRTNGFLEQRGLAPINWALPPL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgacgatcgcatcaaacttgaacccggctggaaaaacgccctgcgtgccgag
ttcgaccagccctacatgcaccagctgcgtgagtttctgcgccaggagtacgccgccggc
aaggaaatctacccgccaggcccgatgatcttcaatgcgctcaactccacgccgcttgag
caggtgaaagtcgtcatcctcggccaggacccctatcacggtccgggccaggcacacggc
ctgtgcttttcggtgcagccgggtgtgccgacgccgccatcgctggtcaacatctacaag
gaactgcatcgcgacctgaacattcccattgccagccatggttatctgcagagctgggcg
gagcagggtgtgctgctgctcaacacgaccatgaccgtcgaacgcgccaatgccgcttcg
catgccaagaaaggctgggaattctttaccgaccggatcatccaggtggtcagcgagcag
tgcccgaatgtggtgttcctgctgtggggcgcacatgcccagagcaagcagaaactgatc
gatggcaccaagcacctggtgctgaaatcggtgcacccgtcgccactgtctgcgtaccgc
gggttcctgggttgcgggcatttcagccggaccaacggcttcctcgaacagcgtggcctg
gcgccgatcaactgggcgttaccgccgctttaa
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