Pseudomonas putida W619: PputW619_1073
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Entry
PputW619_1073 CDS
T00675
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppw
Pseudomonas putida W619
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppw03019
]
PputW619_1073
03009 Ribosome biogenesis [BR:
ppw03009
]
PputW619_1073
03036 Chromosome and associated proteins [BR:
ppw03036
]
PputW619_1073
Enzymes [BR:
ppw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PputW619_1073
Messenger RNA biogenesis [BR:
ppw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PputW619_1073
Ribosome biogenesis [BR:
ppw03009
]
Eukaryotic type
90S particles
RNase
PputW619_1073
Prokaryotic type
rRNA processing factors
PputW619_1073
Chromosome and associated proteins [BR:
ppw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PputW619_1073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
ACA71578
UniProt:
B1J4E0
LinkDB
All DBs
Position
1179684..1180373
Genome browser
AA seq
229 aa
AA seq
DB search
MSASLARLERKLGYTFKDQDQMVLALTHRSYAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDADMQTARERVLAWLTDEFESLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNNKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcccttgcccgtctcgagcgcaagctcggttacaccttcaaagaccaggac
cagatggtgctggccctgacccatcgcagctacgccgggcgcaacaatgagcgcctggag
tttctcggtgatgccattctcaacttcgtggccggcgaggcgctgttcgagcgcttcccg
caggcccgcgaaggccagctgtcgcgcttgcgtgcccgcttggtcaagggcgagaccctg
gcccggctcgctcgcggtttcgacctgggtgagtacctgcgcctgggttccggtgaactc
aagagcggcggtttccgccgcgagtcgatcctggccgatgccctcgaagccctgatcggc
gccatctaccttgatgccgacatgcagaccgctcgcgagcgtgtgttggcctggctgact
gacgagttcgaaagcctgaccctggtcgacaccaacaaagacccgaaaacccgcctgcag
gagttcctgcagtcgcgtagctgtgagctgcctcgttacgaggtggtggacatccagggc
gaaccgcactgccgtaccttcttcgtcgaatgcgaagtggtgctgctgaacaacaagagc
cgtggccagggcgttagccggcgtattgccgagcaagtcgccgccgccgccgcattgatc
gccctgggcgtggagaatggcaatgactga
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