Pseudomonas putida W619: PputW619_1584
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Entry
PputW619_1584 CDS
T00675
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppw
Pseudomonas putida W619
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_1584
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PputW619_1584
Archaeal homologous recombinant proteins
PputW619_1584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
AAA_15
nSTAND3
AAA_18
ABC_ATPase
RsgA_GTPase
MMR_HSR1
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
ACA72089
UniProt:
B1J567
LinkDB
All DBs
Position
complement(1749936..1753580)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPVDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNDIGREAKVPDADGEIPTSDPRNLLRRGTGSGFAEVDFVGVDGHRYRARWEANRARDKA
NGKLQLSRQSLYDLDSEQVLGSGKNEYKQQIEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DKERSELLEKLTNTAIYTRLGQRAFSKAREAGEAHNALKDRASHLLPMAAEARAELDKRL
EQAQQHLKAEQARQRQLEQQRTWLNEQRQLQTQLSEAGAALHTAEQNWQAMAEQRLDLQR
LERLAPQRHQFHRQQALTAQLTPLAAQIAEQQQLQADLLERTQELELALVAARQTLADSQ
TKHSESAPRLRQAFAGQDSLTRLDAELEAQRTARQQADLHVAEGQQQLQQLDEQQQRSLQ
QLAQIDAALADSQHLAGLANAWQAYLPQLKQVMLIGGRLSKGREELPGLQASASEANAQW
QAQHDAFELLFREAKAEPQALAEQIDLLGNMLQDNRKQQRAVEELARLHGREQELRSQLD
GLRERQQHAMQQRQQLIGEGTAAKAELEAAEQALNLTRQLLERQRLARNTSVEELRGQLR
DGEPCPVCGSAEHPFHQPEALLQSLGRHDQVEVDAAQKHVDTLNGKLVELRTQLGVVNAQ
LKDHQQQQAQLGEQLQPLVAHVQSHPLWPALAPQDDKARTVWLESQLKRLDNEIKQDEKR
QSALLALQKDAARLTQQLQAAQEARQQAQRHLDHQHQALANDEQHLQQGLDDLASVLPAD
VLKALSDDPANAFLSLDQQIAQRLQQLEQRKDEQDEQHARQLQLDKLRDQQQTRLQAQQQ
LQHTLAALDEQRLQAQAQLAALLGEHTSAEAWQHHLEVHLEQARALDAQTAERLQALRNQ
GVQLAAELKANTQRQQALEHECQQLQGEIAQWRSEHPELDDSGLDRLLAMDDSQLSTLRQ
HLQAAENAIEQGRVLLQEREQRLQQHAAQAQGDVNGEDLEQSLAGLAEQLNVQEQQCAEL
RAQQADDQRRQQAYQALACEIEQAYQQWQRWARLNALIGSASGDVFRKIAQGYNLDLLLH
HANAQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVCG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcgccattcgcctgaagaacctggcatccctggccggcccggtcgacatc
gacttcaccgccgaacccctggccagcgcaggcctgttcgccatcaccgggcctaccggc
gccggcaagagcaccttgctcgatgcactgtgcctggcgctgttcggcactgtgccgcgg
ctcaatgacatcggccgcgaagccaaggtgccagatgccgatggcgaaatccccacctcg
gacccgcgcaacctgctgcgccgcggcaccggcagcggctttgccgaggtcgacttcgtc
ggcgtcgacggccaccgctaccgcgcgcgctgggaagccaaccgtgcccgcgacaaggcc
aatggcaagctgcaactgagccgtcagagcctctatgacctggacagtgagcaggtgctg
ggcagtggcaagaacgaatacaaacaacagatcgaagcccgtctggggctcaacttcgag
cagttcacccgcgccgtgatgctggcccagagtgaattcggcgccttcctcaaggccgac
gacaaagaacgcagcgaactgctggaaaagctcaccaacaccgcgatctacacgcgcctt
ggccagcgtgccttcagcaaggcccgcgaagccggcgaagcgcacaacgcgctgaaagac
cgcgccagccacctgctgccgatggccgccgaagcccgagccgagctggacaagcgcctg
gagcaggcgcaacaacatctcaaggccgagcaagcccgccagcgtcagctggagcaacag
cgcacctggctcaacgagcaacgccagttgcagacccaactcagcgaagccggtgccgcc
ctgcacactgccgagcaaaactggcaagcaatggccgagcaacgcctcgacctgcagcgc
ctggaacgcctggccccgcaacggcaccagttccatcgccagcaagcactgaccgcgcaa
ctgacgccgttggcggcgcagatcgccgagcaacaacagctgcaagctgatctgctggag
cgcacccaggagctggagcttgcgctggttgcagcgcgccagacactggccgacagccag
acgaaacacagcgaaagtgccccgcgcttgcgccaggcgtttgccggccaggacagccta
acgcgcctagacgctgagctggaggcgcaacgcacggccaggcagcaggccgacctgcac
gtcgccgaaggccaacagcagttgcagcaactggacgaacaacagcagcgcagcctgcaa
cagctggcgcagatcgacgcggccttggcagacagccagcacctggccgggctggccaat
gcctggcaggcctacctgccccaactcaagcaagtgatgctgattggcgggcgcctgagc
aagggccgtgaggaactgcccggcctgcaggccagcgccagcgaagccaatgcgcagtgg
caggcccagcatgacgcgttcgagctgttgttccgcgaagccaaagcagagccgcaggcg
ctggctgagcagatcgacctgctcggcaacatgctgcaggacaatcgcaagcagcagcgg
gcggtcgaagaactggcgcgcctgcatggccgcgagcaggagctgcgcagtcaactcgat
ggtctgcgtgaacgtcagcagcacgccatgcagcaacgccaacagctgattggtgaaggc
accgcagccaaggcggagctggaagcggccgagcaagcgctcaacctcacccgccagttg
ctggagcgtcagcgcctggcgcgcaataccagcgtcgaagagctgcgcggccaactgcgt
gacggcgaaccgtgcccggtctgtggcagcgccgaacacccgttccaccagcctgaggct
ttgctgcagagtctgggccgacatgatcaggtcgaagtagatgctgcgcagaagcacgtc
gatactctcaacggcaaactggtcgagctacgcactcagcttggcgtggtcaacgcccag
ctcaaggaccatcagcagcaacaggcgcagctgggcgaacagttgcagccgctggtcgca
cacgtacagtcgcaccccctctggcctgccctggcgccacaggacgacaaggcccgtaca
gtgtggttggaaagccagctgaagcgcctggacaatgagatcaaacaggacgagaagcgc
caaagcgccctgcttgccctgcaaaaagacgctgcccgcctcacacagcaattacaagcc
gcacaggaggcgcggcaacaggcccagcgccacctggaccaccagcaccaagccctggcc
aacgatgaacagcatctgcaacaaggccttgatgacttggccagtgtgttgccggccgat
gtactgaaggccttgagtgatgatccggccaatgccttcctgagcctcgaccagcagatc
gcgcagcgcctgcagcagctggaacagcgcaaggacgagcaggacgaacagcacgcgcgc
caactgcaactggacaagctgcgcgatcagcagcagacgcgcctgcaggctcagcaacag
ctgcagcatactctcgcagccctcgacgagcagcgtctgcaggctcaggcgcagctggcc
gcgctactcggcgaacacaccagcgccgaagcctggcaacaccacctggaggtgcacctg
gagcaggcccgcgcccttgatgcccagactgctgagcgcctgcaggcgctgcgcaaccag
ggcgtgcaactggccgcagagctcaaggccaatacccagcgccagcaggcactggagcac
gagtgccagcagcttcagggcgaaattgcccaatggcgcagcgaacatcccgaactggat
gacagcgggctcgatcgcttgctggccatggacgactcccagctgagtacgctgcgccag
cacctgcaggcagcagaaaatgccatcgagcaaggccgcgtgctgctccaggagcgtgag
cagcgcctgcaacagcacgccgctcaagcacagggtgacgtgaacggcgaagaccttgag
caatcactggccggccttgccgagcaactgaacgttcaggagcagcagtgcgctgagttg
cgcgcgcagcaggctgacgaccagcgtcgccagcaggcataccaggcccttgcctgcgaa
atcgaacaggcctaccaacagtggcagcgctgggcacgcctgaacgcgctgatcggttcg
gcctctggcgatgtgttccgcaagatcgcccagggctacaaccttgacctgctgctgcac
catgcaaacgcccaattgcgccaactggcgcggcgctatcgcctcaaacgtggcggcagc
gccctggggctgctggtgctggacaccgaaatgggcgacgaactgcgctcggtgcactcg
ctgtccggcggtgagaccttcctggtgtcgctggccctggccctgggcctggcctcgatg
gcgtcgagcaccctgcgtatcgagtcgctgttcatcgacgaggggttcggcagcctcgac
cctgagtcgcttcagttggccatggacgccctcgacggtctgcaggcgcagggccgcaag
gtggcggtgatctcccacgtgcaagagatgcacgagcgcattccggtgcagatccaggtg
cgtcgccagggcaacggcctgagtgatgtcgaggtgtgcgggtga
DBGET
integrated database retrieval system
