Pseudomonas putida W619: PputW619_1585
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Entry
PputW619_1585 CDS
T00675
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppw
Pseudomonas putida W619
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_1585
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PputW619_1585
Archaeal homologous recombinant proteins
PputW619_1585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Cu-oxidase_4
Motif
Other DBs
NCBI-ProteinID:
ACA72090
UniProt:
B1J568
LinkDB
All DBs
Position
complement(1753577..1754815)
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AA seq
412 aa
AA seq
DB search
MRLFHTSDWHLGQSLHGQERDFEHACFLEWLLGQLHLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLDIVMIAGNHDSGSRIELPAALMRRLRTHALGRVHWLDEGQLDA
ERLLIPLTNGRGKVAAWCLALPFLRPAEVTGPQLGDDYLQGINQVHQQLIAAAQKKRKKD
QALVAISHAHMAGGAVSEDSERSLIIGNAEALPAKLFDKAISYVALGHLHKPQKVNRETR
IRYSGSPIPLSFAEINYPHQVLEVELEGTELVSVEARPVPRAVALQRIGPAPLGELLEQL
AELPEIDLLEDPNRQPWLEVRVRLDEPQPDLRQQIENALQGKAVRLIRISTEYAGQGNEQ
DDDQAFVELAQMTPQDLFSRAWEQAYGNPVDEQALADFALLLQDVQLEEEQP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggccaaagcctgcacggccaggaacgc
gacttcgaacacgcctgcttcctcgaatggctgctcggccagctgcacctgcgccagccc
gacgcgctgctgatcgccggtgatatcttcgacacggtcaacccaccggtcaaagcccag
gagcggctttacgacttcatcgtccaggcccacgagcaacagccgaagctggacatcgtg
atgatcgccggcaaccatgactccggctcgcgcatcgagctgcctgccgcgctcatgcgc
cgcctgcgcacccacgcgctgggccgtgtgcactggctcgacgaaggccagctggatgcc
gaacgcctgctgatcccactgaccaacggccgcggcaaggtggccgcctggtgcctggcc
ctgcccttcctgcgcccggccgaggtcaccggcccgcagttgggcgacgactacctgcag
ggcatcaaccaggtgcaccagcaactgatcgcggccgcgcagaaaaaacgcaagaaggac
caggcgctggtcgccatcagccacgcgcacatggccggcggtgctgtgtccgaagactcc
gagcgcagcctgatcatcggtaacgccgaggcccttccggccaaactgttcgacaaggcc
atcagctacgttgccctgggccacctgcacaagccgcagaaggtcaaccgcgaaacccgc
atacgttatagcggctcgccgatcccattgtcgttcgctgaaatcaactatccgcaccag
gtgctggaagtcgagctcgagggcactgaactggtcagcgtcgaagcgcgcccggtgccc
cgtgccgtagccctgcaacgcatcggcccggcgccgctgggcgaattgctcgaacagctc
gccgagctacctgagatcgacttgctcgaagaccccaaccgccagccctggctggaggta
cgcgtgcgcttggacgagcctcagccggacctgcgccagcagatcgaaaacgccctgcaa
ggcaaggcggtgcggctgattcgtatcagtaccgaatatgccggccagggcaacgagcag
gacgacgaccaggcattcgtggaactggcacagatgaccccgcaggacctgttcagccgc
gcttgggaacaggcctacggcaaccccgtcgacgagcaggccctggccgacttcgccctg
ctgctgcaggacgtccagctggaagaggagcagccatga
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