Pseudomonas putida W619: PputW619_1652
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Entry
PputW619_1652 CDS
T00675
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw00071
Fatty acid degradation
ppw00280
Valine, leucine and isoleucine degradation
ppw00310
Lysine degradation
ppw00362
Benzoate degradation
ppw00380
Tryptophan metabolism
ppw00410
beta-Alanine metabolism
ppw00640
Propanoate metabolism
ppw00650
Butanoate metabolism
ppw00907
Pinene, camphor and geraniol degradation
ppw00930
Caprolactam degradation
ppw01100
Metabolic pathways
ppw01110
Biosynthesis of secondary metabolites
ppw01120
Microbial metabolism in diverse environments
ppw01200
Carbon metabolism
ppw01212
Fatty acid metabolism
Module
ppw_M00087
beta-Oxidation
ppw_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PputW619_1652
00650 Butanoate metabolism
PputW619_1652
09103 Lipid metabolism
00071 Fatty acid degradation
PputW619_1652
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PputW619_1652
00310 Lysine degradation
PputW619_1652
00380 Tryptophan metabolism
PputW619_1652
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PputW619_1652
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PputW619_1652
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PputW619_1652
00930 Caprolactam degradation
PputW619_1652
Enzymes [BR:
ppw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PputW619_1652
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PputW619_1652
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PputW619_1652
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PputW619_1652
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NfeD1b_N
SDH_protease
Motif
Other DBs
NCBI-ProteinID:
ACA72157
UniProt:
B1J5A5
LinkDB
All DBs
Position
1835075..1837222
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLDELRQAVEAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRVMSTSAKIGLPEVKLGIYPGFGGTVRLPRLIGSDNAIEWIAAGKENRAEDAL
KVGAVDAVVAPELLQAGALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAQSLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDATVLDVLKPIVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaatcgcctgaccctggacgagctg
cgccaggctgtcgaagccatcaaggccgacgcctcggtgaagggcgtaatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagttcgtcgacaacttcaagctg
cccgaggccgaactggttgccggcaatctggaagccaaccgcatcttcaacgcgttcgaa
gacctcgaagtgccgaccgttgccgcgatcaacggcatcgcactcggcggcggcctggaa
atgtgcctggccgccgactatcgggtcatgtccacctctgccaagatcggcctgccggaa
gtcaagctgggtatctaccccggcttcggcggtaccgtgcgcctgccgcgtctgatcggc
tcggacaacgccatcgagtggattgccgccggcaaggaaaaccgcgctgaagacgccctg
aaagttggcgccgtcgacgccgtcgtcgccccagaactgttgcaggccggggccctcgac
ctggtcaagcgcgccatcagcggtgagctggactacaaggccaagcgccagcccaagctg
gaaaagctcaagctcaatgccatcgagcagatgatggccttcgagactgccaagggcttc
gtcgctggccaggccggcccgaactatccggccccggtcgaagcgatcaagtcgatccag
aaggccgccaacttcggtcgcgacaaggcgctggaagtcgaggcagcaggctttgccaag
ctggccaagacttcggttgcccaaagcctgatcggtctgttcctgaatgatcaggagctc
aagcgcaaagccaaggcccatgacgaaatcgctcacgatgttaagcaggctgccgtgctc
ggcgccggcatcatgggtggcggcatcgcttaccagtcggcggtcaagggcaccccgatc
ctgatgaaggacatccgcgaggaagccatccagctgggcctgaacgaggcgtccaagctg
ctcggcaaccgcgtcgaaaaaggccgcctgactccggcgaagatggccgaggcactcaat
gccattcgcccgacactgtcctacggtgattttgccaacgtcgacatcgtcgtcgaggcc
gtggtcgagaacccgaaggtcaagcaggcagtgctggctgaagtggaaggccaggtgaaa
gaggatgccatccttgcgtccaacacctcgaccatctccatcaacctgctggccaaggcg
ctcaagcgccccgagaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcattcgtggcgagaagtccagtgaagtggcggtcgccaccaccgtggcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcttggtc
aaccgtgtcctgttcccgtacttcggcggctttgccaagctggtcagcgccggtgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggccgatgggcccggcctacctg
atggacgtggtcggcatcgacaccggtcaccacggccgcgatgtgatggccgaaggcttc
ccggaccgcatgaaggacgaacgccgctcggccgtcgacgccctgtatgaggccaatcgc
ctgggccagaagaacggcaagggtttctatgcctacgaaaccgacaagcgtggcaagccg
aagaaggtcttcgacgccaccgtgctcgatgtgctcaagccgatcgtcttcgagcagcgt
gaagtcaccgacgaagacatcatcaactggatgatggtcccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgaaaccgctgctgaagcggacatgggcctggtatac
ggcattggtttccctccgttccgtggcggtgcgctgcgttacatcgattcgatcggtgtg
gccgaattcgttgccctggccgaccagtacgccgatctggggccgctgtaccacccgacc
gcgaagctgcgcgaaatggccaagaatggccagcgcttcttcagctga
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