Pseudomonas putida W619: PputW619_1828
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Entry
PputW619_1828 CDS
T00675
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppw
Pseudomonas putida W619
Pathway
ppw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PputW619_1828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppw03021
]
PputW619_1828
Transcription machinery [BR:
ppw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PputW619_1828
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
PhyR_sigma-like
HTH_11
HTH_24
HTH_29
HTH_17
Xre-like-HTH
DUF7317
HTH_Crp_2
HTH_38
MarR
HTH_40
HTH_20
HTH_AsnC-type
HTH_10
HTH_31
Terminase_5
HTH_Tnp_4
HTH_28
HTH_36
HEAT
Motif
Other DBs
NCBI-ProteinID:
ACA72332
LinkDB
All DBs
Position
complement(2044149..2044658)
Genome browser
AA seq
169 aa
AA seq
DB search
MAVHETDAIIPLEVLYDAQRGWLHSWLKRSLGCSQQAADLAQDTFVRLLVRNQPISTQAP
RALLVRIARGLVVDHWRRDALQRAYLQTLAQLPEASYPSPHVRHEAMQCLERIAQMLDGL
KPTVRDAFLLYQLGGLTHAQIAERLGVSSRTVERHVANALLHCYRLCFE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcatgaaacggatgcgatcattccgcttgaggtcctgtatgacgcccagcgc
ggctggctgcacagctggctgaagcgttccctgggctgctcgcagcaggccgcagacctg
gcccaggacacgttcgtacgcctgttggtgcgcaaccagccgatcagtacccaggcgccc
cgcgctctgctggtacgcatcgcccgcggccttgtggtcgaccattggcggcgcgacgca
ctgcagcgcgcctacctgcaaaccttggcgcagttgcccgaggccagctacccctccccg
cacgtgcgccacgaggccatgcagtgcctcgagcgcatcgcgcaaatgctcgatggcctc
aaacccaccgtgcgcgacgccttcctgctataccagctgggtggcctgacccatgcgcaa
atagccgaacggctaggggtttccagccgcacggtagagcgccacgtggccaacgcgctg
ctgcactgctaccggctgtgcttcgagtga
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