Pseudomonas putida W619: PputW619_2029
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Entry
PputW619_2029 CDS
T00675
Name
(GenBank) transcriptional regulator, LysR family
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
ppw
Pseudomonas putida W619
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppw03000
]
PputW619_2029
Transcription factors [BR:
ppw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PputW619_2029
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ACA72529
UniProt:
B1J741
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Position
2258548..2259741
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AA seq
397 aa
AA seq
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MIDVELPNLMQVRAFIRVAELGSVSRATQVLFRAQSVVTRAIAELEARFAVPLFERHANG
MRLTDYGECLLPRAQRVLAELDGVPGLMGTAQGEPLYLFQARRLQVFVKLCETRHMQTVA
RHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPTVASRDILFPIRRALNELRHLDSDL
SAMQGTLRGVVHVGALPLGRSRILPEAILRFTAQHLQVRVVTNESPFDLLATELRVGDVD
FVLGALRPHDYASDLVGEPLINEEMVLLARRGHPLLHTPLTLKGVHQARWVLPRAGSPAR
GLLDNCFAAAGLPAPWPVVESADLAVIRGLLVRSDMLAAVSAHQLAYEIASGELQRLPLV
LPGTARAIGLMQRSGCLQSPAAVALMACIRQVITEHA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgtcgaactgcccaacctgatgcaagtacgcgcgttcatccgggtcgccgag
ttgggcagcgtttcgcgggcgacgcaggtgttgttccgtgctcagtccgtggtcacccgg
gccatcgccgagctggaggcgcggttcgctgttccgctgttcgagcgccatgccaatggc
atgcgcctgaccgactatggcgagtgcctgctgccgcgtgcacagcgcgtgctggcggaa
ctggacggcgtgccggggttgatgggcaccgcgcagggcgagcccctgtatctgtttcag
gcgcggcgcctgcaggtgttcgtgaaactctgtgaaacacggcacatgcaaaccgtggcg
cggcacttcggccttagccagccggccgtcagtgctgctttgaaagtgctcgaaggcggg
tgcgggcagcccttgttcgtgcgcacgtcgcgcggcctgcagcccactgtggccagccgg
gacattcttttccccatccgccgggcgctgaacgagttgcgccacctggacagtgacctg
agtgcgatgcaaggcaccctgcgcggggtggtgcatgtcggcgcgttacccttgggccgc
tcgcgcattctgccggaggccattttgcgttttaccgcccagcacctacaggtccgggtg
gtgaccaacgaaagcccgttcgacctgctggcaaccgaattacgggtaggggatgtggac
ttcgtgctgggcgccttgcggcctcacgactatgccagcgacctggtgggcgagccgctc
atcaacgaggaaatggtgttgctggcccgccgggggcacccgctgttgcacacccccctt
acgctcaagggcgtgcaccaggcgcgctgggtgttgccgcgggccggctcgccggcgcgc
gggctgctagacaactgcttcgccgccgctggcctgccagcgccgtggccggtggtggaa
agcgctgatctggcggttatccgtggcctgctggtgcgttcagacatgctggcggcggtg
tctgcgcaccagttggcgtacgagattgccagcggcgagctgcaacgcctgccgctggta
ctgcccggtactgcccgcgccatcggcctcatgcagcgcagtggctgcctgcagtcaccg
gcggcggtcgcgctgatggcctgtatccgccaggtgatcaccgagcatgcctga
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