Pseudomonas putida W619: PputW619_2972
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Entry
PputW619_2972 CDS
T00675
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PputW619_2972
09124 Replication and repair
03420 Nucleotide excision repair
PputW619_2972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppw03021
]
PputW619_2972
03036 Chromosome and associated proteins [BR:
ppw03036
]
PputW619_2972
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_2972
Enzymes [BR:
ppw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PputW619_2972
Transcription machinery [BR:
ppw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PputW619_2972
Chromosome and associated proteins [BR:
ppw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PputW619_2972
DNA repair and recombination proteins [BR:
ppw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PputW619_2972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACA73464
UniProt:
B1J9L3
LinkDB
All DBs
Position
complement(3306234..3308495)
Genome browser
AA seq
753 aa
AA seq
DB search
MSYRVAVRALCEFTAKVGDLDLRFTPSPTAQEGIEGHRRVVARRSAGYEAEVALEGAYQG
LQVRGRADGYDPAANRLEEIKTYLGDLARQPGNHRQLHWAQAKVYAWLLCQARQLPAIEV
ALVYLNVDNDSQTLISEHYSAAELQAFFETQCLCFLAWAQGQTQRLAERDRGLQTLGFPY
PQFRQGQRQLAETLYKAVSTGRCLMAQASTGIGKTLGTLFPLLKAMVPQQLDKVFFLTAK
TPGRALALEALQQITRATPQPALRTLELIARDKACEHPDKACHGDACPLAQGFYDRLPAA
REAAARLPLLDRANLRDVALAHQVCPYYLGQEMARWVDVLVADYNYYFDAHALLFGLTQA
NQWRVAVLVDEAHNLVERGRGMYSASLDQGQLQALRQRKPPGLASALDRLNRQWNALYKA
QRAPYLATEQLPDAFLRALQQCIGLIQERLNESPVEVDTHILQFYFQALQFNRVAELFDE
HFLFDVSLREGPRQRRLATLCLRNVTPAKLLGPRMQAARSVTLFSATLSPRHFYTDLLGM
PPDTAWLEVAAPFRAEQLEVRIASQVSTRYHERRASLAPIVALIAEQYQRQPGNYLAFFS
SFEYLQQVHALLTEQHPAIAAWAQAPGMDEAARQAFLARFAADGQGVGFAVLGGAFGEGV
DLPGTRLIGAFVATLGLPQVNPVNEQFKQRLGRQFGAGFDYVYLYPGVRKVIQAAGRVIR
GDQDRGVLVLIDQRFAEPHVQQMFPSWWQIARE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtgagctaccgcgtggcagtgcgcgctttgtgtgagttcactgccaaggtcggtgaccta
gacctgcgcttcacaccgtcgcccactgcccaggagggcatcgagggccatcgccgcgta
gtggccaggcggtccgcggggtacgaagcggaggtcgcactcgaaggcgcttatcagggc
ttgcaggtgcgcggtcgcgccgacggttatgaccccgccgcaaaccgtcttgaagagatc
aagacctaccttggtgacttggcccgccaacctggcaaccatcgccaactgcactgggcg
caggccaaggtctatgcctggctgctgtgccaggcgcgacagttgcccgccatcgaggtg
gcgctggtttacctgaacgtggacaacgacagccagacgctgatcagcgagcattacagc
gctgccgagctgcaagcttttttcgaaacccaatgcctgtgttttctggcttgggcccag
gggcaaacacagcgcctggccgagcgtgaccgaggcctgcagaccctgggctttccttac
ccgcagtttcgccaaggccagcggcaactggccgaaaccctgtacaaggcggtcagcacc
gggcgctgcctgatggcccaggccagcaccggtatcggcaagaccctcggcacactgttc
ccgttgctcaaggccatggtgccgcaacaactcgacaaagtgttcttcctgaccgccaag
accccaggccgggcgcttgcgctggaggccctgcagcagatcacccgggccacgccgcag
cccgcgctgcgcaccctggaactgattgcccgcgacaaggcctgcgagcaccccgacaaa
gcctgccatggcgatgcctgcccattggcccaaggcttctacgaccgcctgccggcggcg
cgtgaggctgcagcccggttgccgttgctggaccgcgcaaacctgcgcgatgtggccttg
gcacaccaggtttgcccgtactacctggggcaggaaatggctcgatgggtcgatgtactg
gttgccgactacaactattatttcgacgctcatgccctgctgttcggcctgacacaggcc
aaccaatggcgcgttgcggttttggttgacgaggctcataacctggtggagcgtggccgc
ggcatgtacagcgccagcctcgatcaggggcagttgcaggcgttgcgccagcgcaaaccg
ccagggctggccagcgcgctggaccggctgaaccgccaatggaatgccctgtataaggcg
cagcgagcgccttatctggccaccgagcagttgccggacgcctttctgcgtgcgctgcag
caatgcatcgggctgatccaggagcgcttgaacgagtcgcccgtcgaagtggatacacac
atcctgcagttctattttcaggcgctgcagttcaaccgggttgccgagctgttcgatgag
catttcctgttcgatgtgagcctgcgcgaaggcccgcgccagcgtcgcctggccaccttg
tgcctgcgtaacgtaacgcccgccaaactgctcggcccgcgcatgcaggcagcgcgcagc
gtgacgttgttctcggccacgctcagcccccggcatttctacaccgacctgctcggcatg
ccaccggatacagcgtggcttgaagtggcggcgccgtttcgcgccgaacagctcgaagtg
cgcatcgccagccaggtctctacccgttatcacgagcgtcgggcctcgctggcaccgatc
gttgcgctgatcgccgagcagtaccagcgccaacccggcaactacctggcgttcttcagc
agtttcgaatacttgcagcaagtgcatgcgctgctgaccgagcagcacccggcgatagca
gcctgggcccaggcgccgggcatggacgaagccgcgcgtcaggcctttctggcgcgcttt
gccgccgacgggcagggcgttggctttgccgtgctgggcggggcttttggcgaaggcgtc
gatctaccgggtacccggctgatcggtgcattcgtcgccaccctcgggttacctcaggtc
aacccggtgaacgaacagttcaagcagcgcctggggcgccagttcggcgctggtttcgac
tacgtctacctgtaccccggtgtacgcaaggtgatccaggctgcaggccgggtgattcgc
ggcgatcaggaccgcggcgtgctggtgttgatcgatcagcgcttcgccgagccgcatgtg
cagcagatgttccccagctggtggcagatagcccgcgaataa
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integrated database retrieval system
