Pseudomonas putida W619: PputW619_3200
Help
Entry
PputW619_3200 CDS
T00675
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppw
Pseudomonas putida W619
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppw03032
]
PputW619_3200
03400 DNA repair and recombination proteins [BR:
ppw03400
]
PputW619_3200
Enzymes [BR:
ppw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PputW619_3200
DNA replication proteins [BR:
ppw03032
]
Prokaryotic type
DNA Topoisomerases
PputW619_3200
DNA repair and recombination proteins [BR:
ppw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PputW619_3200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACA73690
UniProt:
B1JA44
LinkDB
All DBs
Position
3537151..3538173
Genome browser
AA seq
340 aa
AA seq
DB search
MLDCTLPASLHYVDDSQPGLSRRRWRDRFIYLDAQGQRVRDSETLARIAALVIPPAYTDV
WICADPQGHLQATGLDARGRKQYRYHAQWRELRDQHKYGRMLSFAQALPKLRAQLEVHLA
RPGLDREKVMALVVSLLDHTLIRIGNQRYLRDNKSYGLTTLRNRHVKVEGSTIRFQFRGK
RGVEHNVTLRDRRLANLLKRCMELPGQTLFQYLDEEGQRHSIGSSEINQFLQQLTGADFT
AKDYRTWAGSSLALSLLRPLAWEPESEAKRQVANIVKQVAARLGNTPAVCRRCYIHPAVL
EHYALGRLAELPGRRVRKGLDPEEVALLLFLQALEQAQAN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactgtaccttacccgccagcctgcattacgttgacgatagccagcccggcctg
agccggcgccgctggcgcgaccgtttcatctacctcgatgcccaaggccaacgcgtgcgc
gacagcgagacgctggcgcgcatcgccgccctggtgataccaccggcgtacaccgatgtg
tggatctgcgccgacccgcagggtcacctgcaagccacagggctcgatgcacgtggccgc
aagcaataccgttaccatgctcagtggcgcgagctgcgcgaccagcacaaatatgggcgc
atgctgtccttcgcccaggctttgcccaagcttcgcgcacaattggaagtacacctggcg
cgcccagggctggaccgggaaaaggtcatggcgctggtggtcagcctgctggaccacaca
ctgatccgcatcggcaaccagcgctacctgcgcgacaacaaatcctacggtctgaccacg
ctgcgcaaccgccacgtcaaggtcgagggcagcaccatccgcttccagttccgcggaaag
cgtggcgtggaacacaatgtcaccctgcgcgaccgacgcctggccaacctgctcaaacgg
tgcatggagctgccggggcagacgctgttccagtacctggacgaagaaggccagcggcac
agcattgggtccagtgagatcaaccagttcctgcaacaactgaccggggccgatttcact
gccaaggattaccgcacctgggcaggtagcagcctggcactgagcctgctcaggcccctg
gcctgggagccggagagcgaggcaaagcgccaggttgcgaacatcgtcaagcaggtagcc
gcgcgcctgggcaacaccccggccgtgtgcaggcgctgctacatccaccctgccgtgctg
gagcattatgccctggggcgcttggcagagcttcctggccgccgtgtgcgcaaaggcctt
gatcctgaagaagtggcgttgctgttgtttttgcaggcactggagcaagcacaagccaat
tga
DBGET
integrated database retrieval system
