Pseudomonas putida W619: PputW619_3844
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Entry
PputW619_3844 CDS
T00675
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppw
Pseudomonas putida W619
Pathway
ppw00061
Fatty acid biosynthesis
ppw00071
Fatty acid degradation
ppw01100
Metabolic pathways
ppw01212
Fatty acid metabolism
ppw02024
Quorum sensing
ppw04146
Peroxisome
Module
ppw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PputW619_3844
00071 Fatty acid degradation
PputW619_3844
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PputW619_3844
09145 Cellular community - prokaryotes
02024 Quorum sensing
PputW619_3844
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppw01004
]
PputW619_3844
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppw04147
]
PputW619_3844
Enzymes [BR:
ppw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PputW619_3844
Lipid biosynthesis proteins [BR:
ppw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PputW619_3844
Exosome [BR:
ppw04147
]
Exosomal proteins
Exosomal proteins of breast milk
PputW619_3844
Exosomal proteins of breast cancer cells
PputW619_3844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
Motif
Other DBs
NCBI-ProteinID:
ACA74325
UniProt:
B1JCP9
LinkDB
All DBs
Position
complement(4280584..4282281)
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AA seq
565 aa
AA seq
DB search
MIDHFWKDKYPAGITAEINPDEFPNIQAVLKQSCQRFADKPAFSNLGKTITYGELYALSG
AFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTQVRHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPKAVRFNDTLALGKGQPVAEANPQANDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLQEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNVLISNPRDLPAMVKELGKWK
FSGFVGLNTLFVALCNNEAFRALDFSALKITLSGGMALQLSVAERWKAVTGCAICEGYGM
TETSPVAAVNPSEANQVGTIGIPVPSTLCKVIDDSGSELPLGEVGELCVKGPQVMKGYWQ
REDATAEILDSDGWLKTGDIALIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPG
VLQCAAIGVPDEKSGELIKVFIVVKPGMTVTKEQVMEHMRANVTGYKVPRYIEFRDALPT
TNVGKILRRELRDEELKKQGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccatttttggaaggataaatacccagccgggattacggcggaaatcaatcct
gacgaatttcccaatatccaggcggtactcaagcaatcctgccagcgctttgccgacaaa
ccggcctttagcaacctgggcaagaccatcacctacggcgagttgtatgccctgtcgggc
gcttttgcggcctggctgcagcagcacaccgacctcaaaccgggtgatcgcattgccgtc
cagctgccgaatgtcctgcagtacccggtagcggtgttcggcgccatgcgcgccgggctg
atcgtagtcaacaccaacccgctgtacaccgcgcgtgagatggaacaccagttcaacgac
tccggtgccaaggccttggtatgcctggccaacatggctcacttggccgagaaggttgta
cccaagacccaggtcaggcacgtcatcgtcactgaagtggcggacctgttgccaccgctc
aagcgcctgctgatcaacagcgtgatcaagtacgtgaagaagatggtgccggcctacaac
ctgccgaaggccgtgcgcttcaacgataccctggcgctgggcaagggccagccggtggcc
gaggccaacccgcaagccaatgatgtggccgtgctgcagtacaccggcggcaccacaggt
gtggccaagggcgcaatgctgacgcaccgcaacctggtggccaacatgctgcagtgccgg
gcgctgatgggttcgaacctgcaagaaggttgcgagatcctcatcacgccgctgccgctg
taccacatctatgcctttaccttccattgcatggcgatgatgctgatcggcaaccataac
gtgctgatcagcaacccgcgtgacttgccggcaatggtcaaggagctgggcaagtggaaa
ttcagcggcttcgtcggcctcaacaccctgttcgttgccctgtgcaacaacgaggcgttc
cgtgcgctggacttctcggcattgaagatcaccttgtccggtggcatggcgctgcaactg
agcgtggccgagcgctggaaagccgtcaccggttgcgccatctgcgaaggctatggcatg
accgagaccagcccggtagcggcggtcaatccgtccgaagccaatcaggtcggcaccatc
ggtatcccggtgccctcgaccctgtgcaaggtcatcgatgacagtggcagcgaactgcca
ttgggcgaggtgggcgagctgtgcgtcaaggggccgcaggtgatgaaaggctactggcag
cgtgaagatgccaccgccgagatcctcgacagtgacggctggctgaagaccggggacatt
gccctgatccagccggatggctacatgcgcatcgttgaccgcaagaaggacatgatcctg
gtctcgggcttcaatgtgtatcccaacgagctggaggacgtactggctgccctgccgggt
gtgctgcagtgcgctgcgatcggggtgccggacgaaaagtcgggcgaactgatcaaggtg
ttcattgtggtcaagccgggcatgaccgtcaccaaggagcaggtgatggagcacatgcgt
gccaacgtcaccggctacaaggtgccgcgttacatcgagttccgcgatgcgctgccaacg
accaacgtgggcaagatcctgcgccgcgagttgcgtgatgaagagctgaaaaagcagggt
ttgaagaagatcgcctga
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